This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3f6c
From Proteopedia
m (Protected "3f6c" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==CRYSTAL STRUCTURE OF N-TERMINAL DOMAIN OF POSITIVE TRANSCRIPTION REGULATOR evgA FROM ESCHERICHIA COLI== | |
| - | + | <StructureSection load='3f6c' size='340' side='right' caption='[[3f6c]], [[Resolution|resolution]] 1.45Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3f6c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F6C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3F6C FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">evgA, b2369, JW2366 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 Escherichia coli K-12])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f6c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f6c OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3f6c RCSB], [http://www.ebi.ac.uk/pdbsum/3f6c PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3f6c TOPSAN]</span></td></tr> | |
| - | == | + | </table> |
| - | [[3f6c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F6C OCA]. | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f6/3f6c_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Escherichia coli k-12]] | [[Category: Escherichia coli k-12]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Bain, K | + | [[Category: Bain, K]] |
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | [[Category: Freeman, J | + | [[Category: Freeman, J]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Patskovsky, Y | + | [[Category: Patskovsky, Y]] |
| - | [[Category: Romero, R | + | [[Category: Romero, R]] |
| - | [[Category: Sauder, J M | + | [[Category: Sauder, J M]] |
| - | [[Category: Smith, D | + | [[Category: Smith, D]] |
| - | [[Category: Wasserman, S | + | [[Category: Wasserman, S]] |
| - | [[Category: Wu, B | + | [[Category: Wu, B]] |
[[Category: Activator]] | [[Category: Activator]] | ||
[[Category: Dna binding protein]] | [[Category: Dna binding protein]] | ||
[[Category: Dna-binding]] | [[Category: Dna-binding]] | ||
| - | [[Category: New | + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] |
| - | + | ||
| - | + | ||
[[Category: Phosphoprotein]] | [[Category: Phosphoprotein]] | ||
[[Category: Positive transcription regulator evga]] | [[Category: Positive transcription regulator evga]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Transcription regulation]] | [[Category: Transcription regulation]] | ||
[[Category: Two-component regulatory system]] | [[Category: Two-component regulatory system]] | ||
Revision as of 12:49, 6 November 2014
CRYSTAL STRUCTURE OF N-TERMINAL DOMAIN OF POSITIVE TRANSCRIPTION REGULATOR evgA FROM ESCHERICHIA COLI
| |||||||||||
Categories: Escherichia coli k-12 | Almo, S C | Bain, K | Burley, S K | Freeman, J | Structural genomic | Patskovsky, Y | Romero, R | Sauder, J M | Smith, D | Wasserman, S | Wu, B | Activator | Dna binding protein | Dna-binding | NYSGXRC, New York SGX Research Center for Structural Genomics | Phosphoprotein | Positive transcription regulator evga | PSI, Protein structure initiative | Transcription | Transcription regulation | Two-component regulatory system

