This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3gnl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3gnl" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3gnl.png|left|200px]]
+
==Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b==
-
 
+
<StructureSection load='3gnl' size='340' side='right' caption='[[3gnl]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
{{STRUCTURE_3gnl| PDB=3gnl | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3gnl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes_serotype_4b_str._f2365 Listeria monocytogenes serotype 4b str. f2365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GNL FirstGlance]. <br>
-
===Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b===
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LMOf2365_1472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=265669 Listeria monocytogenes serotype 4b str. F2365])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gnl RCSB], [http://www.ebi.ac.uk/pdbsum/3gnl PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3gnl TOPSAN]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[3gnl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes_serotype_4b_str._f2365 Listeria monocytogenes serotype 4b str. f2365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNL OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gnl_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Listeria monocytogenes serotype 4b str. f2365]]
[[Category: Listeria monocytogenes serotype 4b str. f2365]]
-
[[Category: Almo, S C.]]
+
[[Category: Almo, S C]]
-
[[Category: Burley, S K.]]
+
[[Category: Burley, S K]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
-
[[Category: Ramagopal, U A.]]
+
-
[[Category: Toro, R.]]
+
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
[[Category: Structural genomic]]
[[Category: Structural genomic]]
 +
[[Category: Ramagopal, U A]]
 +
[[Category: Toro, R]]
 +
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
 +
[[Category: PSI, Protein structure initiative]]
[[Category: Uncharacterized protein]]
[[Category: Uncharacterized protein]]
[[Category: Unknown function]]
[[Category: Unknown function]]

Revision as of 13:23, 6 November 2014

Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b

3gnl, resolution 1.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools