3bkd
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | + | ==High resolution Crystal structure of Transmembrane domain of M2 protein== | |
| - | + | <StructureSection load='3bkd' size='340' side='right' caption='[[3bkd]], [[Resolution|resolution]] 2.05Å' scene=''> | |
| - | + | == Structural highlights == | |
| + | <table><tr><td colspan='2'>[[3bkd]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BKD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BKD FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> | ||
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bkd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bkd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3bkd RCSB], [http://www.ebi.ac.uk/pdbsum/3bkd PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The M2 protein from influenza A virus is a pH-activated proton channel that mediates acidification of the interior of viral particles entrapped in endosomes. M2 is the target of the anti-influenza drugs amantadine and rimantadine; recently, resistance to these drugs in humans, birds and pigs has reached more than 90% (ref. 1). Here we describe the crystal structure of the transmembrane-spanning region of the homotetrameric protein in the presence and absence of the channel-blocking drug amantadine. pH-dependent structural changes occur near a set of conserved His and Trp residues that are involved in proton gating. The drug-binding site is lined by residues that are mutated in amantadine-resistant viruses. Binding of amantadine physically occludes the pore, and might also perturb the pK(a) of the critical His residue. The structure provides a starting point for solving the problem of resistance to M2-channel blockers. | ||
| - | + | Structural basis for the function and inhibition of an influenza virus proton channel.,Stouffer AL, Acharya R, Salom D, Levine AS, Di Costanzo L, Soto CS, Tereshko V, Nanda V, Stayrook S, DeGrado WF Nature. 2008 Jan 31;451(7178):596-9. PMID:18235504<ref>PMID:18235504</ref> | |
| - | + | ||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
==See Also== | ==See Also== | ||
| Line 11: | Line 21: | ||
*[[M2 protein|M2 protein]] | *[[M2 protein|M2 protein]] | ||
*[[Proton Channels|Proton Channels]] | *[[Proton Channels|Proton Channels]] | ||
| - | + | == References == | |
| - | == | + | <references/> |
| - | < | + | __TOC__ |
| - | [[Category: Acharya, R | + | </StructureSection> |
| - | [[Category: Salom, D | + | [[Category: Acharya, R]] |
| - | [[Category: Stouffer, A L | + | [[Category: Salom, D]] |
| + | [[Category: Stouffer, A L]] | ||
[[Category: Influenza a virus m2 protein]] | [[Category: Influenza a virus m2 protein]] | ||
[[Category: M2tm]] | [[Category: M2tm]] | ||
Revision as of 14:15, 17 December 2014
High resolution Crystal structure of Transmembrane domain of M2 protein
| |||||||||||
