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3ikh
From Proteopedia
(Difference between revisions)
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| - | + | ==Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae== | |
| - | + | <StructureSection load='3ikh' size='340' side='right' caption='[[3ikh]], [[Resolution|resolution]] 1.88Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3ikh]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_mgh_78578 Klebsiella pneumoniae subsp. pneumoniae mgh 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IKH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IKH FirstGlance]. <br> |
| - | [[3ikh]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_mgh_78578 Klebsiella pneumoniae subsp. pneumoniae mgh 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IKH OCA]. | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3i3y|3i3y]], [[3h49|3h49]], [[3hic|3hic]], [[3ie7|3ie7]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">KPN78578_16990, KPN78578_16990/5340552, KPN_01729 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272620 Klebsiella pneumoniae subsp. pneumoniae MGH 78578])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribokinase Ribokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.15 2.7.1.15] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ikh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ikh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ikh RCSB], [http://www.ebi.ac.uk/pdbsum/3ikh PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ik/3ikh_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Klebsiella pneumoniae subsp. pneumoniae mgh 78578]] | [[Category: Klebsiella pneumoniae subsp. pneumoniae mgh 78578]] | ||
[[Category: Ribokinase]] | [[Category: Ribokinase]] | ||
| - | [[Category: Burley, S K.]] | ||
| - | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]] | ||
| - | [[Category: Satyanarayana, L.]] | ||
| - | [[Category: Swaminathan, S.]] | ||
| - | [[Category: 11206l1]] | ||
[[Category: Atp]] | [[Category: Atp]] | ||
[[Category: D-ribose metabolic process]] | [[Category: D-ribose metabolic process]] | ||
| - | [[Category: Kinase]] | ||
| - | [[Category: New york sgx research center for structural genomic]] | ||
| - | [[Category: Nysgxrc]] | ||
| - | [[Category: Pfkb family]] | ||
| - | [[Category: Protein structure initiative]] | ||
| - | [[Category: Psi-ii]] | ||
| - | [[Category: Ribokinase]] | ||
[[Category: Ribose]] | [[Category: Ribose]] | ||
| - | [[Category: Sad]] | ||
| - | [[Category: Structural genomic]] | ||
| - | [[Category: Transferase]] | ||
Revision as of 11:47, 6 November 2014
Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae
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