3k4d

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{{STRUCTURE_3k4d| PDB=3k4d | SCENE= }}
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==Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound==
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===Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound===
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<StructureSection load='3k4d' size='340' side='right' caption='[[3k4d]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
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{{ABSTRACT_PUBMED_21051639}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3k4d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K4D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K4D FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EVA:(2S,3R,4S,5R)-3,4,5-TRIHYDROXY-6-OXOPIPERIDINE-2-CARBOXYLIC+ACID'>EVA</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3k46|3k46]], [[3k4a|3k4a]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b1617, gurA, gusA, JW1609, uidA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-glucuronidase Beta-glucuronidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.31 3.2.1.31] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k4d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3k4d RCSB], [http://www.ebi.ac.uk/pdbsum/3k4d PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The dose-limiting side effect of the common colon cancer chemotherapeutic CPT-11 is severe diarrhea caused by symbiotic bacterial beta-glucuronidases that reactivate the drug in the gut. We sought to target these enzymes without killing the commensal bacteria essential for human health. Potent bacterial beta-glucuronidase inhibitors were identified by high-throughput screening and shown to have no effect on the orthologous mammalian enzyme. Crystal structures established that selectivity was based on a loop unique to bacterial beta-glucuronidases. Inhibitors were highly effective against the enzyme target in living aerobic and anaerobic bacteria, but did not kill the bacteria or harm mammalian cells. Finally, oral administration of an inhibitor protected mice from CPT-11-induced toxicity. Thus, drugs may be designed to inhibit undesirable enzyme activities in essential microbial symbiotes to enhance chemotherapeutic efficacy.
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==About this Structure==
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Alleviating cancer drug toxicity by inhibiting a bacterial enzyme.,Wallace BD, Wang H, Lane KT, Scott JE, Orans J, Koo JS, Venkatesh M, Jobin C, Yeh LA, Mani S, Redinbo MR Science. 2010 Nov 5;330(6005):831-5. PMID:21051639<ref>PMID:21051639</ref>
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[[3k4d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K4D OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:021051639</ref><references group="xtra"/><references/>
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</div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Beta-glucuronidase]]
[[Category: Beta-glucuronidase]]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Redinbo, M R.]]
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[[Category: Redinbo, M R]]
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[[Category: Wallace, B D.]]
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[[Category: Wallace, B D]]
[[Category: Alpha/beta barrel]]
[[Category: Alpha/beta barrel]]
[[Category: Beta-sandwich domain]]
[[Category: Beta-sandwich domain]]

Revision as of 15:53, 18 December 2014

Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound

3k4d, resolution 2.39Å

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