This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3m2p
From Proteopedia
(Difference between revisions)
m (Protected "3m2p" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus== | |
| - | + | <StructureSection load='3m2p' size='340' side='right' caption='[[3m2p]], [[Resolution|resolution]] 2.95Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3m2p]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M2P FirstGlance]. <br> |
| - | [[3m2p]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2P OCA]. | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr> |
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BC_5271 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1396 Bacillus cereus])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/UDP-N-acetylglucosamine_4-epimerase UDP-N-acetylglucosamine 4-epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.3.7 5.1.3.7] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m2p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3m2p RCSB], [http://www.ebi.ac.uk/pdbsum/3m2p PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m2/3m2p_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Bacillus cereus]] | [[Category: Bacillus cereus]] | ||
[[Category: UDP-N-acetylglucosamine 4-epimerase]] | [[Category: UDP-N-acetylglucosamine 4-epimerase]] | ||
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Swaminathan, S | + | [[Category: Swaminathan, S]] |
| - | [[Category: Zhang, Z | + | [[Category: Zhang, Z]] |
| - | + | ||
[[Category: Isomerase]] | [[Category: Isomerase]] | ||
| - | [[Category: New | + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] |
| - | + | [[Category: PSI, Protein structure initiative]] | |
| - | [[Category: Protein structure initiative | + | |
| - | + | ||
[[Category: Sgxny]] | [[Category: Sgxny]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Udp]] | [[Category: Udp]] | ||
Revision as of 13:57, 6 November 2014
The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus
| |||||||||||
