3mvb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3mvb" [edit=sysop:move=sysop])
Line 1: Line 1:
-
{{STRUCTURE_3mvb| PDB=3mvb | SCENE= }}
+
==Crystal structure of a triple RFY mutant of human MTERF1 bound to the termination sequence==
-
===Crystal structure of a triple RFY mutant of human MTERF1 bound to the termination sequence===
+
<StructureSection load='3mvb' size='340' side='right' caption='[[3mvb]], [[Resolution|resolution]] 2.79&Aring;' scene=''>
-
{{ABSTRACT_PUBMED_20550934}}
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3mvb]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MVB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MVB FirstGlance]. <br>
 +
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3mva|3mva]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MTERF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mvb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mvb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mvb RCSB], [http://www.ebi.ac.uk/pdbsum/3mvb PDBsum]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mv/3mvb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Defects in mitochondrial gene expression are associated with aging and disease. Mterf proteins have been implicated in modulating transcription, replication and protein synthesis. We have solved the structure of a member of this family, the human mitochondrial transcriptional terminator MTERF1, bound to dsDNA containing the termination sequence. The structure indicates that upon sequence recognition MTERF1 unwinds the DNA molecule, promoting eversion of three nucleotides. Base flipping is critical for stable binding and transcriptional termination. Additional structural and biochemical results provide insight into the DNA binding mechanism and explain how MTERF1 recognizes its target sequence. Finally, we have demonstrated that the mitochondrial pathogenic G3249A and G3244A mutations interfere with key interactions for sequence recognition, eliminating termination. Our results provide insight into the role of mterf proteins and suggest a link between mitochondrial disease and the regulation of mitochondrial transcription.
-
==Function==
+
Helix unwinding and base flipping enable human MTERF1 to terminate mitochondrial transcription.,Yakubovskaya E, Mejia E, Byrnes J, Hambardjieva E, Garcia-Diaz M Cell. 2010 Jun 11;141(6):982-93. PMID:20550934<ref>PMID:20550934</ref>
-
[[http://www.uniprot.org/uniprot/MTERF_HUMAN MTERF_HUMAN]] Transcription termination factor. Binds to a 28 bp region within the tRNA(Leu(uur)) gene at a position immediately adjacent to and downstream of the 16S rRNA gene; this region comprises a tridecamer sequence critical for directing accurate termination. Binds DNA along the major grove and promotes DNA bending and partial unwinding. Promotes base flipping. Probably requires one or more components for termination activity.<ref>PMID:20550934</ref>
+
-
==About this Structure==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[3mvb]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MVB OCA].
+
</div>
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:020550934</ref><references group="xtra"/><references/>
+
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Byrnes, J.]]
+
[[Category: Byrnes, J]]
-
[[Category: Garcia-Diaz, M.]]
+
[[Category: Garcia-Diaz, M]]
-
[[Category: Hambardjieva, E.]]
+
[[Category: Hambardjieva, E]]
-
[[Category: Mejia, E.]]
+
[[Category: Mejia, E]]
-
[[Category: Yakubovskaya, E.]]
+
[[Category: Yakubovskaya, E]]
[[Category: All alpha-helix]]
[[Category: All alpha-helix]]
[[Category: Mitochondria]]
[[Category: Mitochondria]]

Revision as of 15:54, 18 December 2014

Crystal structure of a triple RFY mutant of human MTERF1 bound to the termination sequence

3mvb, resolution 2.79Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3mvb"
Personal tools