3q5c
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of four-way junction with sticky end== | |
| - | + | <StructureSection load='3q5c' size='340' side='right' caption='[[3q5c]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| + | <table><tr><td colspan='2'>[[3q5c]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q5C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3Q5C FirstGlance]. <br> | ||
| + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3q5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q5c OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3q5c RCSB], [http://www.ebi.ac.uk/pdbsum/3q5c PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | We report here the crystal structure of the partially self-complementary decameric sequence d(CGGCGGCCGC), which self assembles to form a four-way junction with sticky ends. Each junction binds to four others through Watson-Crick base pairing at the sticky ends to form a rhombic structure. The rhombuses bind to each other and form two dimensional tiles. The tiles stack to form the crystal. The crystal diffracted in the space group P1 to a resolution of 2.5A. The junction has the anti-parallel stacked-X conformation like other junction structures, though the formation of the rhombic net noticeably alters the details of the junction geometry. | ||
| - | + | The sequence d(CGGCGGCCGC) self-assembles into a two dimensional rhombic DNA lattice.,Venkadesh S, Mandal PK, Gautham N Biochem Biophys Res Commun. 2011 Apr 15;407(3):548-51. Epub 2011 Mar 16. PMID:21419105<ref>PMID:21419105</ref> | |
| - | + | ||
| - | == | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| - | + | </div> | |
| - | [[Category: Gautham, N | + | == References == |
| - | [[Category: Mandal, P K | + | <references/> |
| - | [[Category: Venkadesh, S | + | __TOC__ |
| + | </StructureSection> | ||
| + | [[Category: Gautham, N]] | ||
| + | [[Category: Mandal, P K]] | ||
| + | [[Category: Venkadesh, S]] | ||
[[Category: Dna]] | [[Category: Dna]] | ||
[[Category: Sticky end]] | [[Category: Sticky end]] | ||
Revision as of 10:17, 19 December 2014
Crystal structure of four-way junction with sticky end
| |||||||||||
Categories: Gautham, N | Mandal, P K | Venkadesh, S | Dna | Sticky end
