2l7u
From Proteopedia
(Difference between revisions)
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- | + | ==Structure of CEL-PEP-RAGE V domain complex== | |
- | === | + | <StructureSection load='2l7u' size='340' side='right' caption='[[2l7u]], [[NMR_Ensembles_of_Models | 25 NMR models]]' scene=''> |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[2l7u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L7U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2L7U FirstGlance]. <br> | ||
+ | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MCL:NZ-(1-CARBOXYETHYL)-LYSINE'>MCL</scene></td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGER, RAGE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2l7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l7u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2l7u RCSB], [http://www.ebi.ac.uk/pdbsum/2l7u PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Nonenzymatic protein glycation results in the formation of advanced glycation end products (AGEs) that are implicated in the pathology of diabetes, chronic inflammation, Alzheimer's disease, and cancer. AGEs mediate their effects primarily through a receptor-dependent pathway in which AGEs bind to a specific cell surface associated receptor, the Receptor for AGEs (RAGE). N(varepsilon)-carboxy-methyl-lysine (CML) and N(varepsilon)-carboxy-ethyl-lysine (CEL), constitute two of the major AGE structures found in tissue and blood plasma, and are physiological ligands of RAGE. The solution structure of a CEL-containing peptide-RAGE V domain complex reveals that the carboxyethyl moiety fits inside a positively charged cavity of the V domain. Peptide backbone atoms make specific contacts with the V domain. The geometry of the bound CEL peptide is compatible with many CML (CEL)-modified sites found in plasma proteins. The structure explains how such patterned ligands as CML (CEL)-proteins bind to RAGE and contribute to RAGE signaling. | ||
- | + | Advanced glycation end product recognition by the receptor for AGEs.,Xue J, Rai V, Singer D, Chabierski S, Xie J, Reverdatto S, Burz DS, Schmidt AM, Hoffmann R, Shekhtman A Structure. 2011 May 11;19(5):722-32. PMID:21565706<ref>PMID:21565706</ref> | |
- | + | ||
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
- | == | + | <references/> |
- | + | __TOC__ | |
+ | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: Burz, D | + | [[Category: Burz, D]] |
- | [[Category: Chabierski, S | + | [[Category: Chabierski, S]] |
- | [[Category: Frolov, S | + | [[Category: Frolov, S]] |
- | [[Category: Hoffman, R | + | [[Category: Hoffman, R]] |
- | [[Category: Rai, V | + | [[Category: Rai, V]] |
- | [[Category: Reverdatto, S | + | [[Category: Reverdatto, S]] |
- | [[Category: Schmidt, A | + | [[Category: Schmidt, A]] |
- | [[Category: Shekhtman, A | + | [[Category: Shekhtman, A]] |
- | [[Category: Singer, D | + | [[Category: Singer, D]] |
- | [[Category: Xie, J | + | [[Category: Xie, J]] |
- | [[Category: Xue, J | + | [[Category: Xue, J]] |
[[Category: Allergen]] | [[Category: Allergen]] | ||
[[Category: Cleavage on pair of basic residue]] | [[Category: Cleavage on pair of basic residue]] |
Revision as of 12:17, 18 December 2014
Structure of CEL-PEP-RAGE V domain complex
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Categories: Homo sapiens | Burz, D | Chabierski, S | Frolov, S | Hoffman, R | Rai, V | Reverdatto, S | Schmidt, A | Shekhtman, A | Singer, D | Xie, J | Xue, J | Allergen | Cleavage on pair of basic residue | Lipid-binding | Metal-binding | Phosphoprotein | Secreted | V domain