3q5y

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{{STRUCTURE_3q5y| PDB=3q5y | SCENE= }}
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==V beta/V beta homodimerization-based pre-TCR model suggested by TCR beta crystal structures==
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===V beta/V beta homodimerization-based pre-TCR model suggested by TCR beta crystal structures===
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<StructureSection load='3q5y' size='340' side='right' caption='[[3q5y]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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{{ABSTRACT_PUBMED_22566796}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3q5y]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q5Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3Q5Y FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3q5t|3q5t]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3q5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q5y OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3q5y RCSB], [http://www.ebi.ac.uk/pdbsum/3q5y PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The alphabeta T cell receptor (TCR) is a multimeric complex whose beta chain plays a crucial role in thymocyte development as well as antigen recognition by mature T lymphocytes. We report here crystal structures of individual beta subunits, termed N15beta (Vbeta5.2Dbeta2Jbeta2.6Cbeta2) and N30beta (Vbeta13Dbeta1Jbeta1.1Cbeta2), derived from two alphabeta TCRs specific for the immunodominant vesicular stomatitis virus octapeptide (VSV-8) bound to the murine H-2K(b) MHC class I molecule. The crystal packing of the N15beta structure reveals a homodimer formed through two Vbeta domains. The Vbeta/Vbeta module is topologically very similar to the Valpha/Vbeta module in the N15alphabeta heterodimer. By contrast, in the N30beta structure, the Vbeta domain's external hydrophobic CFG face is covered by the neighboring molecule's Cbeta domain. In conjunction with systematic investigation of previously published TCR single-subunit structures, we identified several conserved residues forming a concave hydrophobic patch at the center of the CFG outer face of the Vbeta and other V-type Ig-like domains. This hydrophobic patch is shielded from solvent exposure in the crystal packing, implying that it is unlikely to be thermodynamically stable if exposed on the thymocyte surface. Accordingly, we propose a dimeric pre-TCR model distinct from those suggested previously by others and discuss its functional and structural implications.
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==About this Structure==
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A conserved hydrophobic patch on Vbeta domains revealed by TCRbeta chain crystal structures: Implications for pre-TCR dimerization.,Zhou B, Chen Q, Mallis RJ, Zhang H, Liu JH, Reinherz EL, Wang JH Front Immunol. 2011;2:5. doi: 10.3389/fimmu.2011.00005. Epub 2011 Mar 1. PMID:22566796<ref>PMID:22566796</ref>
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[[3q5y]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q5Y OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:022566796</ref><references group="xtra"/><references/>
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</div>
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[[Category: Mus musculus]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Lk3 transgenic mice]]
[[Category: Chen, Q.]]
[[Category: Chen, Q.]]
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[[Category: Wang, J-H.]]
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[[Category: Wang, J H.]]
[[Category: Zhang, H.]]
[[Category: Zhang, H.]]
[[Category: Antigen peptide/mhc]]
[[Category: Antigen peptide/mhc]]

Revision as of 08:38, 20 October 2014

V beta/V beta homodimerization-based pre-TCR model suggested by TCR beta crystal structures

3q5y, resolution 1.90Å

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