4g2d
From Proteopedia
(Difference between revisions)
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- | {{STRUCTURE_4g2d| PDB=4g2d | SCENE= }} | ||
- | ===Crystal structure of the hyperthermophilic Sulfolobus islandicus PLL SisLac=== | ||
- | {{ABSTRACT_PUBMED_23071703}} | ||
- | == | + | ==Crystal structure of the hyperthermophilic Sulfolobus islandicus PLL SisLac== |
- | [[4g2d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <StructureSection load='4g2d' size='340' side='right' caption='[[4g2d]], [[Resolution|resolution]] 2.70Å' scene=''> |
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4g2d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulik Sulik]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4G2D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4G2D FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr> | ||
+ | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vc5|2vc5]], [[2vc7|2vc7]], [[3uf9|3uf9]]</td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">M164_0332, sislac ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=426118 SULIK])</td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aryldialkylphosphatase Aryldialkylphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.8.1 3.1.8.1] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4g2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4g2d OCA], [http://pdbe.org/4g2d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4g2d RCSB], [http://www.ebi.ac.uk/pdbsum/4g2d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4g2d ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | BACKGROUND: A new member of the Phosphotriesterase-Like Lactonases (PLL) family from the hyperthermophilic archeon Sulfolobus islandicus (SisLac) has been characterized. SisLac is a native lactonase that exhibits a high promiscuous phosphotriesterase activity. SisLac thus represents a promising target for engineering studies, exhibiting both detoxification and bacterial quorum quenching abilities, including human pathogens such as Pseudomonas aeruginosa. METHODOLOGY/PRINCIPAL FINDINGS: Here, we describe the substrate specificity of SisLac, providing extensive kinetic studies performed with various phosphotriesters, esters, N-acyl-homoserine lactones (AHLs) and other lactones as substrates. Moreover, we solved the X-ray structure of SisLac and structural comparisons with the closely related SsoPox structure highlighted differences in the surface salt bridge network and the dimerization interface. SisLac and SsoPox being close homologues (91% sequence identity), we undertook a mutational study to decipher these structural differences and their putative consequences on the stability and the catalytic properties of these proteins. CONCLUSIONS/SIGNIFICANCE: We show that SisLac is a very proficient lactonase against aroma lactones and AHLs as substrates. Hence, data herein emphasize the potential role of SisLac as quorum quenching agent in Sulfolobus. Moreover, despite the very high sequence homology with SsoPox, we highlight key epistatic substitutions that influence the enzyme stability and activity. | ||
- | + | Structural and enzymatic characterization of the lactonase SisLac from Sulfolobus islandicus.,Hiblot J, Gotthard G, Chabriere E, Elias M PLoS One. 2012;7(10):e47028. doi: 10.1371/journal.pone.0047028. Epub 2012 Oct 10. PMID:23071703<ref>PMID:23071703</ref> | |
- | <ref | + | |
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 4g2d" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Aryldialkylphosphatase]] | [[Category: Aryldialkylphosphatase]] | ||
- | [[Category: | + | [[Category: Sulik]] |
- | [[Category: Chabriere, E | + | [[Category: Chabriere, E]] |
- | [[Category: Elias, M | + | [[Category: Elias, M]] |
- | [[Category: Gotthard, G | + | [[Category: Gotthard, G]] |
- | [[Category: Hiblot, J | + | [[Category: Hiblot, J]] |
[[Category: Bioscavenger]] | [[Category: Bioscavenger]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] |
Revision as of 13:24, 19 April 2017
Crystal structure of the hyperthermophilic Sulfolobus islandicus PLL SisLac
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