3vj9

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{{STRUCTURE_3vj9| PDB=3vj9 | SCENE= }}
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==Crystal structure of the human squalene synthase==
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===Crystal structure of the human squalene synthase===
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<StructureSection load='3vj9' size='340' side='right' caption='[[3vj9]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
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{{ABSTRACT_PUBMED_22474324}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3vj9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VJ9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VJ9 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vj8|3vj8]], [[3vja|3vja]], [[3vjb|3vjb]], [[3vjc|3vjc]], [[3vjd|3vjd]], [[3vje|3vje]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FDFT1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Squalene_synthase Squalene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.21 2.5.1.21] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vj9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vj9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vj9 RCSB], [http://www.ebi.ac.uk/pdbsum/3vj9 PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Zaragozic acids (ZAs) belong to a family of fungal metabolites with nanomolar inhibitory activity toward squalene synthase (SQS). The enzyme catalyzes the committed step of sterol synthesis and has attracted attention as a potential target for antilipogenic and antiinfective therapies. Here, we have determined the structure of ZA-A complexed with human SQS. ZA-A binding induces a local conformational change in the substrate binding site, and its C-6 acyl group also extends over to the cofactor binding cavity. In addition, ZA-A effectively inhibits a homologous bacterial enzyme, dehydrosqualene synthase (CrtM), which synthesizes the precursor of staphyloxanthin in Staphylococcus aureus to cope with oxidative stress. Size reduction at Tyr(248) in CrtM further increases the ZA-A binding affinity, and it reveals a similar overall inhibitor binding mode to that of human SQS/ZA-A except for the C-6 acyl group. These structures pave the way for further improving selectivity and development of a new generation of anticholesterolemic and antimicrobial inhibitors.
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==About this Structure==
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Binding modes of zaragozic acid A to human squalene synthase and staphylococcal dehydrosqualene synthase.,Liu CI, Jeng WY, Chang WJ, Ko TP, Wang AH J Biol Chem. 2012 May 25;287(22):18750-7. Epub 2012 Apr 3. PMID:22474324<ref>PMID:22474324</ref>
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[[3vj9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VJ9 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:022474324</ref><references group="xtra"/><references/>
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</div>
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==See Also==
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*[[Squalene synthase|Squalene synthase]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Squalene synthase]]
[[Category: Squalene synthase]]
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[[Category: Chang, W J.]]
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[[Category: Chang, W J]]
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[[Category: Jeng, W Y.]]
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[[Category: Jeng, W Y]]
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[[Category: Liu, C I.]]
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[[Category: Liu, C I]]
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[[Category: Wang, A H.J.]]
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[[Category: Wang, A H.J]]
[[Category: Cholesterol biosynthesis]]
[[Category: Cholesterol biosynthesis]]
[[Category: Farnesyl-diphosphate farnesyltransferase]]
[[Category: Farnesyl-diphosphate farnesyltransferase]]

Revision as of 06:28, 21 December 2014

Crystal structure of the human squalene synthase

3vj9, resolution 1.52Å

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