4hhl
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
- | + | ==High resolution crystal structure of Glucose Isomerase from Streptomyces sp. SK== | |
- | + | <StructureSection load='4hhl' size='340' side='right' caption='[[4hhl]], [[Resolution|resolution]] 1.73Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[4hhl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_sp._sk Streptomyces sp. sk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HHL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HHL FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4hhm|4hhm]]</td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xylA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=253732 Streptomyces sp. SK])</td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Xylose_isomerase Xylose isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.5 5.3.1.5] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hhl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hhl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4hhl RCSB], [http://www.ebi.ac.uk/pdbsum/4hhl PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The role of residue 219 in the physicochemical properties of D-glucose isomerase from Streptomyces sp. SK strain (SKGI) was investigated by site-directed mutagenesis and structural studies. Mutants G219A, G219N, and G219F were generated and characterized. Comparative studies of their physicochemical properties with those of the wild-type enzyme highlighted that mutant G219A displayed increased specific activity and thermal stability compared to that of the wild-type enzyme, while for G219N and G219F, these properties were considerably decreased. A double mutant, SKGI F53L/G219A, displayed a higher optimal temperature and a higher catalytic efficiency than both the G219A mutant and the wild-type enzyme and showed a half-life time of about 150 min at 85 degrees C as compared to 50 min for wild-type SKGI. Crystal structures of SKGI wild-type and G219A enzymes were solved to 1.73 and 2.15 A, respectively, and showed that the polypeptide chain folds into two structural domains. The larger domain consists of a (beta/alpha)8 unit, and the smaller domain forms a loop of alpha helices. Detailed analyses of the three-dimensional structures highlighted minor but important changes in the active site region as compared to that of the wild-type enzyme leading to a displacement of both metal ions, and in particular that in site M2. The structural analyses moreover revealed how the substitution of G219 by an alanine plays a crucial role in improving the thermostability of the mutant enzyme. | ||
- | + | Identification of critical residues for the activity and thermostability of Streptomyces sp. SK glucose isomerase.,Ben Hlima H, Bejar S, Riguet J, Haser R, Aghajari N Appl Microbiol Biotechnol. 2013 Mar 6. PMID:23463249<ref>PMID:23463249</ref> | |
- | + | ||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
==See Also== | ==See Also== | ||
*[[D-xylose isomerase|D-xylose isomerase]] | *[[D-xylose isomerase|D-xylose isomerase]] | ||
- | + | == References == | |
- | == | + | <references/> |
- | + | __TOC__ | |
+ | </StructureSection> | ||
[[Category: Streptomyces sp. sk]] | [[Category: Streptomyces sp. sk]] | ||
[[Category: Xylose isomerase]] | [[Category: Xylose isomerase]] | ||
- | [[Category: Aghajari, N | + | [[Category: Aghajari, N]] |
- | [[Category: Haser, R | + | [[Category: Haser, R]] |
- | [[Category: Hlima, H Ben | + | [[Category: Hlima, H Ben]] |
- | [[Category: Riguet, J | + | [[Category: Riguet, J]] |
[[Category: Isomerase]] | [[Category: Isomerase]] | ||
[[Category: Tim-barrel]] | [[Category: Tim-barrel]] |
Revision as of 12:37, 21 December 2014
High resolution crystal structure of Glucose Isomerase from Streptomyces sp. SK
|