4l46

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{{STRUCTURE_4l46| PDB=4l46 | SCENE= }}
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==Crystal structures of human p70S6K1-WT==
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===Crystal structures of human p70S6K1-WT===
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<StructureSection load='4l46' size='340' side='right' caption='[[4l46]], [[Resolution|resolution]] 3.01&Aring;' scene=''>
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{{ABSTRACT_PUBMED_23731517}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4l46]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L46 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4L46 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5FI:2-{[4-(5-ETHYLPYRIMIDIN-4-YL)PIPERAZIN-1-YL]METHYL}-5-(TRIFLUOROMETHYL)-1H-BENZIMIDAZOLE'>5FI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4l3j|4l3j]], [[4l3l|4l3l]], [[4l42|4l42]], [[4l43|4l43]], [[4l44|4l44]], [[4l45|4l45]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPS6KB1, hCG_1815774 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4l46 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l46 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4l46 RCSB], [http://www.ebi.ac.uk/pdbsum/4l46 PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The activity of the ribosome protein subunit 6 kinase 1 (S6K1) is stimulated by phosphorylation of Thr389 in the hydrophobic motif by mTORC1 and phosphorylation of Thr229 in the activation loop by PDK1; however, the order of the two events is still ambiguous. Here we report six crystal structures of the S6K1 kinase domain alone or plus the hydrophobic motif in various forms, in complexes with a highly specific inhibitor. The structural data together with the biochemical data reveal in vivo phosphorylation of Thr389 in the absence of Thr229 phosphorylation and demonstrate the importance of two conserved residues, Gln140 and Arg121, in the establishment of a hydrogen-bonding network between the N-lobe and the hydrophobic motif. Phosphorylation of Thr389 or introduction of a corresponding negatively charged group leads to reinforcement of the network and stabilization of helix alphaC. Furthermore, comparisons of S6K1 with other AGC family kinases suggest that the structural and sequence differences in the hydrophobic motif and helix alphaC account for their divergence in PDK1 dependency. Together, these results indicate that phosphorylation of the hydrophobic motif in S6K1 is independent of and probably, precedes and promotes phosphorylation of the activation loop.
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==About this Structure==
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Crystal structures of S6K1 provide insights into the regulation mechanism of S6K1 by the hydrophobic motif.,Wang J, Zhong C, Wang F, Qu F, Ding J Biochem J. 2013 Jun 3. PMID:23731517<ref>PMID:23731517</ref>
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[[4l46]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L46 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:023731517</ref><references group="xtra"/><references/>
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</div>
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==See Also==
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*[[Ribosomal protein S6 kinase|Ribosomal protein S6 kinase]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Ding, J.]]
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[[Category: Ding, J]]
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[[Category: Wang, J.]]
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[[Category: Wang, J]]
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[[Category: Zhong, C.]]
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[[Category: Zhong, C]]
[[Category: Protein kinase]]
[[Category: Protein kinase]]
[[Category: Transferase]]
[[Category: Transferase]]

Revision as of 15:16, 21 December 2014

Crystal structures of human p70S6K1-WT

4l46, resolution 3.01Å

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