3vr0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
{{STRUCTURE_3vr0| PDB=3vr0 | SCENE= }}
+
==Crystal structure of Pyrococcus furiosus PbaB, an archaeal proteasome activator==
-
===Crystal structure of Pyrococcus furiosus PbaB, an archaeal proteasome activator===
+
<StructureSection load='3vr0' size='340' side='right' caption='[[3vr0]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
{{ABSTRACT_PUBMED_23555947}}
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3vr0]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VR0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VR0 FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AU:GOLD+ION'>AU</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gaa|3gaa]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PF1142 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=186497 Pyrococcus furiosus DSM 3638])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vr0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vr0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vr0 RCSB], [http://www.ebi.ac.uk/pdbsum/3vr0 PDBsum]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Assembly of the eukaryotic 20S proteasome is an ordered process involving several proteins operating as proteasome assembly factors including PAC1-PAC2 but archaeal 20S proteasome subunits can spontaneously assemble into an active cylindrical architecture. Recent bioinformatic analysis identified archaeal PAC1-PAC2 homologs PbaA and PbaB. However, it remains unclear whether such assembly factor-like proteins play an indispensable role in orchestration of proteasome subunits in archaea. We revealed that PbaB forms a homotetramer and exerts a dual function as an ATP-independent proteasome activator and a molecular chaperone through its tentacle-like C-terminal segments. Our findings provide insights into molecular evolution relationships between proteasome activators and assembly factors.
-
==About this Structure==
+
An archaeal homolog of proteasome assembly factor functions as a proteasome activator.,Kumoi K, Satoh T, Murata K, Hiromoto T, Mizushima T, Kamiya Y, Noda M, Uchiyama S, Yagi H, Kato K PLoS One. 2013;8(3):e60294. doi: 10.1371/journal.pone.0060294. Epub 2013 Mar 21. PMID:23555947<ref>PMID:23555947</ref>
-
[[3vr0]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VR0 OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<ref group="xtra">PMID:023555947</ref><references group="xtra"/><references/>
+
</div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Pyrococcus furiosus dsm 3638]]
[[Category: Pyrococcus furiosus dsm 3638]]
-
[[Category: Hiromoto, T.]]
+
[[Category: Hiromoto, T]]
-
[[Category: Kamiya, Y.]]
+
[[Category: Kamiya, Y]]
-
[[Category: Kato, K.]]
+
[[Category: Kato, K]]
-
[[Category: Kumoi, K.]]
+
[[Category: Kumoi, K]]
-
[[Category: Mizushima, T.]]
+
[[Category: Mizushima, T]]
-
[[Category: Murata, K.]]
+
[[Category: Murata, K]]
-
[[Category: Noda, M.]]
+
[[Category: Noda, M]]
-
[[Category: Satoh, T.]]
+
[[Category: Satoh, T]]
-
[[Category: Uchiyama, S.]]
+
[[Category: Uchiyama, S]]
-
[[Category: Yagi, H.]]
+
[[Category: Yagi, H]]
[[Category: Proteasome]]
[[Category: Proteasome]]
[[Category: Proteasome activator]]
[[Category: Proteasome activator]]
[[Category: Protein binding]]
[[Category: Protein binding]]

Revision as of 06:55, 21 December 2014

Crystal structure of Pyrococcus furiosus PbaB, an archaeal proteasome activator

3vr0, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools