4kzz

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{{Large structure}}
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==Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A==
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{{STRUCTURE_4kzz| PDB=4kzz | SCENE= }}
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<StructureSection load='4kzz' size='340' side='right' caption='[[4kzz]], [[Resolution|resolution]] 7.03&Aring;' scene=''>
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===Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A===
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== Structural highlights ==
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{{ABSTRACT_PUBMED_23873042}}
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<table><tr><td colspan='2'>[[4kzz]] is a 37 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KZZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KZZ FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EIF1AX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kzz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kzz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kzz RCSB], [http://www.ebi.ac.uk/pdbsum/4kzz PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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During translation initiation in eukaryotes, the small ribosomal subunit binds messenger RNA at the 5' end and scans in the 5' to 3' direction to locate the initiation codon, form the 80S initiation complex and start protein synthesis. This simple, yet intricate, process is guided by multiple initiation factors. Here we determine the structures of three complexes of the small ribosomal subunit that represent distinct steps in mammalian translation initiation. These structures reveal the locations of eIF1, eIF1A, mRNA and initiator transfer RNA bound to the small ribosomal subunit and provide insights into the details of translation initiation specific to eukaryotes. Conformational changes associated with the captured functional states reveal the dynamics of the interactions in the P site of the ribosome. These results have functional implications for the mechanism of mRNA scanning.
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==Function==
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The initiation of mammalian protein synthesis and mRNA scanning mechanism.,Lomakin IB, Steitz TA Nature. 2013 Jul 21. doi: 10.1038/nature12355. PMID:23873042<ref>PMID:23873042</ref>
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[[http://www.uniprot.org/uniprot/G1TN72_RABIT G1TN72_RABIT]] May play a role during erythropoiesis through regulation of transcription factor DDIT3 (By similarity).[HAMAP-Rule:MF_03122] [[http://www.uniprot.org/uniprot/IF1AX_HUMAN IF1AX_HUMAN]] Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
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==About this Structure==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[4kzz]] is a 37 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KZZ OCA].
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</div>
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==Reference==
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==See Also==
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<ref group="xtra">PMID:023873042</ref><references group="xtra"/><references/>
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*[[Ribosome 3D structures|Ribosome 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Oryctolagus cuniculus]]
[[Category: Oryctolagus cuniculus]]
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[[Category: Lomakin, I B.]]
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[[Category: Lomakin, I B]]
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[[Category: Steitz, T A.]]
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[[Category: Steitz, T A]]
[[Category: Ribosome]]
[[Category: Ribosome]]
[[Category: Translation initiation]]
[[Category: Translation initiation]]

Revision as of 14:42, 21 December 2014

Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A

4kzz, resolution 7.03Å

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