3p20

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{{STRUCTURE_3p20| PDB=3p20 | SCENE= }}
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==Crystal structure of vanadate bound subunit A of the A1AO ATP synthase==
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===Crystal structure of vanadate bound subunit A of the A1AO ATP synthase===
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<StructureSection load='3p20' size='340' side='right' caption='[[3p20]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
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{{ABSTRACT_PUBMED_21396943}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3p20]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P20 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3P20 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=VO4:VANADATE+ION'>VO4</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3i72|3i72]], [[3i4l|3i4l]], [[3ikj|3ikj]], [[3i73|3i73]], [[3m4y|3m4y]], [[3mfy|3mfy]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">atpA, PH1975 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 Pyrococcus horikoshii])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3p20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p20 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3p20 RCSB], [http://www.ebi.ac.uk/pdbsum/3p20 PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Archaeal A-ATP synthases catalyze the formation of the energy currency ATP. The chemical mechanisms of ATP synthesis in A-ATP synthases are unknown. We have solved the crystal structure of a transition-like state of the vanadate-bound form of catalytic subunit A (A(Vi)) of the A-ATP synthase from Pyrococcus horikoshii OT3. Two orthovanadate molecules were observed in the A(Vi) structure, one of which interacts with the phosphate binding loop through residue S238. The second vanadate is positioned in the transient binding site, implicating for the first time the pathway for phosphate entry to the catalytic site. Moreover, since residues K240 and T241 are proposed to be essential for catalysis, the mutant structures of K240A and T241A were also determined. The results demonstrate the importance of these two residues for transition-state stabilization. The structures presented shed light on the diversity of catalytic mechanisms used by the biological motors A- and F-ATP synthases and eukaryotic V-ATPases.
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==Function==
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The Transition-Like State and P(i) Entrance into the Catalytic A Subunit of the Biological Engine A-ATP Synthase.,Manimekalai MS, Kumar A, Jeyakanthan J, Gruber G J Mol Biol. 2011 Mar 16. PMID:21396943<ref>PMID:21396943</ref>
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[[http://www.uniprot.org/uniprot/VATA_PYRHO VATA_PYRHO]] Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit.
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==About this Structure==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[3p20]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P20 OCA].
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</div>
==See Also==
==See Also==
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*[[A-ATP Synthase|A-ATP Synthase]]
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*[[ATPase|ATPase]]
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*[[ATP synthase|ATP synthase]]
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== References ==
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<references/>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:021396943</ref><references group="xtra"/><references/>
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</StructureSection>
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
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[[Category: Gruber, G.]]
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[[Category: Gruber, G]]
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[[Category: Jeyakanthan, J.]]
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[[Category: Jeyakanthan, J]]
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[[Category: Kumar, A.]]
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[[Category: Kumar, A]]
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[[Category: Manimekalai, M S.S.]]
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[[Category: Manimekalai, M S.S]]
[[Category: Atp binding]]
[[Category: Atp binding]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]

Revision as of 06:43, 19 December 2014

Crystal structure of vanadate bound subunit A of the A1AO ATP synthase

3p20, resolution 2.85Å

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