4fyc
From Proteopedia
(Difference between revisions)
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- | + | ==Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori== | |
- | + | <StructureSection load='4fyc' size='340' side='right' caption='[[4fyc]], [[Resolution|resolution]] 2.31Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[4fyc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FYC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FYC FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4fyb|4fyb]]</td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HP_0377 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85962 Helicobacter pylori 26695])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fyc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fyc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4fyc RCSB], [http://www.ebi.ac.uk/pdbsum/4fyc PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Maturation of cytochrome c is carried out in the bacterial periplasm, where specialized thiol-disulfide oxidoreductases provide the correct reduction of oxidized apocytochrome c before covalent haem attachment. HP0377 from Helicobacter pylori is a thioredoxin-fold protein that has been implicated as a component of system II for cytochrome c assembly and shows limited sequence similarity to Escherichia coli DsbC, a disulfide-bond isomerase. To better understand the role of HP0377, its crystal structures have been determined in both reduced and partially oxidized states, which are highly similar to each other. Sedimentation-equilibrium experiments indicate that HP0377 is monomeric in solution. HP0377 adopts a thioredoxin fold but shows distinctive variations as in other thioredoxin-like bacterial periplasmic proteins. The active site of HP0377 closely resembles that of E. coli DsbC. A reductase assay suggests that HP0377 may play a role as a reductase in the biogenesis of holocytochrome c553 (HP1227). Binding experiments indicate that it can form a covalent complex with HP0518, a putative L,D-transpeptidase with a catalytic cysteine residue, via a disulfide bond. Furthermore, physicochemical properties of HP0377 and its R86A variant have been determined. These results suggest that HP0377 may perform multiple functions as a reductase in H. pylori. | ||
- | + | Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori.,Yoon JY, Kim J, An DR, Lee SJ, Kim HS, Im HN, Yoon HJ, Kim JY, Kim SJ, Han BW, Suh SW Acta Crystallogr D Biol Crystallogr. 2013 May;69(Pt 5):735-46. doi:, 10.1107/S0907444913001236. Epub 2013 Apr 11. PMID:23633582<ref>PMID:23633582</ref> | |
- | + | ||
- | == | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
- | + | </div> | |
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Helicobacter pylori 26695]] | [[Category: Helicobacter pylori 26695]] | ||
- | [[Category: An, D R | + | [[Category: An, D R]] |
- | [[Category: Han, B W | + | [[Category: Han, B W]] |
- | [[Category: Im, H N | + | [[Category: Im, H N]] |
- | [[Category: Kim, H S | + | [[Category: Kim, H S]] |
- | [[Category: Kim, J | + | [[Category: Kim, J]] |
- | [[Category: Kim, J Y | + | [[Category: Kim, J Y]] |
- | [[Category: Kim, S | + | [[Category: Kim, S]] |
- | [[Category: Lee, S J | + | [[Category: Lee, S J]] |
- | [[Category: Suh, S W | + | [[Category: Suh, S W]] |
- | [[Category: Yoon, H | + | [[Category: Yoon, H]] |
- | [[Category: Yoon, J Y | + | [[Category: Yoon, J Y]] |
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
[[Category: Reductase]] | [[Category: Reductase]] | ||
[[Category: Thioredoxin fold]] | [[Category: Thioredoxin fold]] |
Revision as of 11:45, 21 December 2014
Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori
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Categories: Helicobacter pylori 26695 | An, D R | Han, B W | Im, H N | Kim, H S | Kim, J | Kim, J Y | Kim, S | Lee, S J | Suh, S W | Yoon, H | Yoon, J Y | Oxidoreductase | Reductase | Thioredoxin fold