Sandbox Reserved 785

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<Structure load='3TL2' size='500' frame='true' align='right' caption='Malate Dehydrogenase' scene='Insert optional scene name here' />
<Structure load='3TL2' size='500' frame='true' align='right' caption='Malate Dehydrogenase' scene='Insert optional scene name here' />
<scene name='56/563197/Unedited/1'>Unedited Enzyme</scene>
<scene name='56/563197/Unedited/1'>Unedited Enzyme</scene>
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The <scene name='56/563197/Secondary_stucture/1'>Secondary Structure Elements</scene> shows the alpha helices (red) and the beta sheets (orange). <scene name='56/563197/H-bonds/1'>Hydrogen Bonds</scene> in the backbone (green) show that the beta sheets (orange) are parallel in the protein since the bonds are angled not straight between the sheets.
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The <scene name='56/563197/Secondary_stucture/1'>Secondary Structure Elements</scene> shows the alpha helices (red) and the beta sheets (orange). <scene name='56/563197/H-bonds/1'>Hydrogen Bonds</scene> in the backbone (green) show that the beta sheets (orange) are parallel in the protein since the bonds are angled not straight between the sheets. When looking at malate dehydrogenase in ball and stick form the <scene name='56/563197/Hydrophobic_and_hydrophillic/1'>Hydrophobic Residues</scene> (grey) are contained primarily in the center of the polypeptide, while the hydrophilic residues (cyan) are primarily toward the outside of the molecule.

Revision as of 19:54, 8 October 2013

This Sandbox is Reserved from Oct 10, 2013, through May 20, 2014 for use in the course "CHEM 410 Biochemistry 1 and 2" taught by Hanna Tims at the Messiah College. This reservation includes Sandbox Reserved 780 through Sandbox Reserved 807.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Help:Editing

Malate Dehydrogenase

Drag the structure with the mouse to rotate

The shows the alpha helices (red) and the beta sheets (orange). in the backbone (green) show that the beta sheets (orange) are parallel in the protein since the bonds are angled not straight between the sheets. When looking at malate dehydrogenase in ball and stick form the (grey) are contained primarily in the center of the polypeptide, while the hydrophilic residues (cyan) are primarily toward the outside of the molecule.

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