Ribosomal protein L7/L12
From Proteopedia
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[[3nvi]] – PfRPL7Ae + NOP5/NOP56 + RNA – ''Pyrococcus furiosus''<br /> | [[3nvi]] – PfRPL7Ae + NOP5/NOP56 + RNA – ''Pyrococcus furiosus''<br /> | ||
[[3nvk]] – PfRPL7Ae + NOP5/NOP56 + fibrillarin-like methyltransferase + RNA | [[3nvk]] – PfRPL7Ae + NOP5/NOP56 + fibrillarin-like methyltransferase + RNA | ||
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| - | === L7 in 50S subunit+RNA === | ||
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| - | [[2j01]], [[2j03]], [[1yl3]], [[3i8i]], [[1giy]], [[4kbu]], [[4kbw]], [[4kcz]], [[4kd2]], [[4kd9]], [[4kdb]], [[4kdh]], [[4kdk]] - TtRPL7 in 50S subunit+5S RRNA+23S RRNA<br /> | ||
| - | [[2gya]], [[2gyc]], [[4kix]] - EcRPL7 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br /> | ||
| - | [[3uos]], [[3sgf]] - EcRPL7 in 50S subunit+5S RRNA+23S RRNA<br /> | ||
| - | [[2zjq]], [[2zjr]] - DrRPL7 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br /> | ||
| - | [[1kqs]], [[2qa4]], [[1qvg]] - HmRPL7 in 50S subunit+5S RRNA+23S RRNA+CCA - ''Haloarcula marismortui''<br /> | ||
| - | [[1jj2]], [[1ffk]], [[3cc2]], [[1s72]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA<br /> | ||
| - | [[1vqm]], [[1vql]], [[1vq7]], [[1vq4]], [[1vq5]], [[1vqp]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+transition state analogue<br /> | ||
| - | [[3cc7]], [[3cce]], [[3ccj]], [[3ccl]], [[3ccm]], [[3ccq]], [[3ccr]], [[3ccs]], [[3ccu]], [[3ccv]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA (mutant)<br /> | ||
| - | [[1yj9]] - HmRPL7Ae in 50S subunit (mutant)+5S RRNA+23S RRNA<br /> | ||
| - | [[3cma]], [[3cme]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+CCA+CCA-Phe-CAP-BIO<br /> | ||
| - | [[1vq6]], [[1vqn]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+C-hpmn+CCA-Phe-CAP-BIO<br /> | ||
| - | [[1vqk]], [[1q86]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+CCDA-Phe-CAP-BIO<br /> | ||
| - | [[1vqo]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+CCPMN<br /> | ||
| - | [[1qvf]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+deacylated tRNA minihelix | ||
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| - | === L7 in 50S subunit + antibiotics === | ||
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| - | [[3cxc]] – RPL7Ae in 50S subunit+5S RRNA+23S RRNA +oxazolidinone inhibitor – ''Halobacterium marismortui''<br /> | ||
| - | [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3i55]], [[3i56]], [[3g4s]], [[3g6e]], [[3g71]], [[3qex]], [[3cpw]], [[3cc4]], [[2otj]], [[2otl]], [[1yit]], [[1q7y]], [[1q81]], [[1q82]], [[1n8r]], [[1nji]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+antibiotic <br /> | ||
| - | [[1m90]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin<br /> | ||
| - | [[3cd6]], [[1yhq]], [[1yi2]], [[1yij]], [[1yjn]], [[1yjw]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA (mutant)+antibiotic<br /> | ||
| - | [[1vq8]], [[1vq9]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+CCDA-Phe-CAP-BIO+sparsomycin<br /> | ||
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| - | === L7 in 60S subunit === | ||
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| - | [[3jyw]] - RPL7 in 60S subunit – ''Thermomyces lanuginosus'' – Cryo-EM<br /> | ||
| - | [[3izr]] – RPL7 in 60S subunit – wheat – Cryo-EM<br /> | ||
| - | [[3j39]] – RPL7 in 60S subunit – ''Drosophila melanogaster'' – Cryo-EM<br /> | ||
| - | [[3j3b]] – RPL7 in 60S subunit – human – Cryo-EM<br /> | ||
| - | [[3o58]], [[3o5h]] – yRPL7 in 60S subunit+25S RRNA+5SRRNA+5.8RRNA<br /> | ||
| - | [[3izs]] – yRPL7 in 60S ribosomal subunit – yeast - Cryo-EM<br /> | ||
| - | [[3u5e]], [[3u5i]] – yRPL7 in 60S ribosomal subunit<br /> | ||
| - | [[4b6a]] - yRPL7 in 60S ribosomal subunit + P0 + P1 +P2 + ARX1 - Cryo-EM | ||
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| - | === L7 in large + small ribosomal subunit === | ||
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| - | [[2zkr]] - RPL7 in 60S ribosomal subunit+30S ribosomal subunit+28S RRNA+5.8S RRNA – Cryo-EM – dog | ||
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| - | === L7 in 50S subunit + various proteins === | ||
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| - | [[1w2b]] - HmRPL7Ae in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal <br /> | ||
| - | [[3lwo]], [[3lwp]], [[3lwq]], [[3lwr]], [[3lwv]], [[3hax]], [[3hay]], [[3hjw]] – PfRPL7Ae+pseudouridine synthase+ribosome biogenesis protein NOP10+H/ACA RNA+RNA fragment <br /> | ||
| - | [[2hvy]] - PfRPL7Ae+pseudouridine synthase+ribosome biogenesis protein NOP10+H/ACA RNA+small nucleolar RNP<br /> | ||
| - | [[3nmu]] - PfRPL7Ae + NOP5 related protein + RNA + fibrillarin-like methyltransferase<br /> | ||
| - | [[3id5]] – SsRPL7Ae+pre RNA splicing protein+fibrillarin+half C/D RNA – ''Sulfolobus solfataricus'' | ||
=== L7 in part of 50S subunit === | === L7 in part of 50S subunit === | ||
Revision as of 06:56, 24 April 2014
Ribosomal protein L7 (RPL7) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is part of the L7/L12 complex. Two dimers of L7/L12 are present in the large subunit. The L7/L12 probably interacts with EF-Tu. L7 and L12 differ by one post-translational modification at the N-terminal of L7. In the archaea, the L7Ae acts as a subunit of RNase P.
3D Structures of Ribosomal protein L7
Updated on 24-April-2014
RPL7
1rqu, 1rqv - EcRPL7 - Escherichia coli - NMR
1dd3, 1dd4 - TmRPL7/L12 - Thermotoga maritima
1rqs – EcRPL7/L12 - NMR
1rqt - EcRPL7/L12 N-terminal – NMR
1ctf - EcRPL7/L12 C-terminal
3paf - MjRPL7Ae (mutant)
1ra4, 1xbi – MjRPL7Ae – Methasnocaldococcus jannaschii
1sds – MjRPL7Ae+box H/ACA RNA
2fc3 – RPL7Ae – Aeropyrum pernix
2czw – RPL7Ae – Pyrococcus horikoshii
1pxw - RPL7Ae – Pyrococcus abyssi
1rlg – RPL7Ae+RNA fragment – Archaeoglobus fulgidus
3pla - RPL7Ae + pre mRNA splicing protein + fibrillarin-like methyltransferase + RNA - Sulfolobus solfataricus
3o85 - RPL7Ae – Giardia lamblia
3nvi – PfRPL7Ae + NOP5/NOP56 + RNA – Pyrococcus furiosus
3nvk – PfRPL7Ae + NOP5/NOP56 + fibrillarin-like methyltransferase + RNA
L7 in part of 50S subunit
2bcw – EcRPL7/L12+EcRPL11+EF-G
1zav, 1zaw, 1zax - TmRPL7/L12 N-terminal +RPL10
Proteopedia Page Contributors and Editors (what is this?)
Michal Harel, Alexander Berchansky, Joel L. Sussman, Jaime Prilusky
