Sandbox Reserved 784

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Revision as of 00:00, 18 October 2013 (edit) Student (Talk | contribs) (→Structure) ← Previous diff		Revision as of 01:10, 18 October 2013 (edit) (undo) Student (Talk | contribs) (→Structure) Next diff →
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	==Structure==		==Structure==
-	Overall enzyme	+	Pyruvate kinase is a <scene name='56/563196/Overall_structure_final/1'>homotetramer</scene>, meaning it has four identical <scene name='56/563196/Chain_a/3'>chains</scene>.
-		+	This enzyme contains both <scene name='56/563196/Alpha/1'>alpha helices</scene> and <scene name='56/563196/Beta/1'>beta sheets</scene>. It has three <scene name='56/563196/Domains/2'>domains</scene>. <scene name='56/563196/Domains_1/1'>Domain 1</scene> consists of an alpha-beta-alpha 3-layer sandwich. <scene name='56/563196/Domains_2/1'>Domain 2</scene> consists of a parallel alpha-beta barrel. <scene name='56/563196/Domains_3/1'>Domain 3</scene> consists of an anti-parallel beta-barrel.
-	Secondary structure	+
	Hydrogen bonds and disulfide bonds		Hydrogen bonds and disulfide bonds
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	Solvent		Solvent
-	The ligands, substrate, cofacts, etc	+	The ligands, substrate, cofactors, etc
	Ligand contacts		Ligand contacts
	catalytic residues		catalytic residues

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Revision as of 01:10, 18 October 2013

This Sandbox is Reserved from Oct 10, 2013, through May 20, 2014 for use in the course "CHEM 410 Biochemistry 1 and 2" taught by Hanna Tims at the Messiah College. This reservation includes Sandbox Reserved 780 through Sandbox Reserved 807.

To get started: Click the edit this page tab at the top. Save the page after each step, then edit it again. Click the 3D button (when editing, above the wikitext box) to insert Jmol. show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page. Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc. More help: Help:Editing

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Introduction

Pyruvate kinase (aka transferase, PDB 4IP7) What's it do Research about it

Structure

Pyruvate kinase is a , meaning it has four identical . This enzyme contains both and . It has three . consists of an alpha-beta-alpha 3-layer sandwich. consists of a parallel alpha-beta barrel. consists of an anti-parallel beta-barrel.

Hydrogen bonds and disulfide bonds

Hydrophobic and hydrophilic residues

Solvent

The ligands, substrate, cofactors, etc

Ligand contacts

catalytic residues