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Ribosomal protein L2
From Proteopedia
(Difference between revisions)
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[[1rl2]] – RPL2 – ''Geobacillus stearothermophilus'' | [[1rl2]] – RPL2 – ''Geobacillus stearothermophilus'' | ||
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| - | === L2 in 50S subunit+RNA === | ||
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| - | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL2 in 50S subunit+RNA fragments – ''Thermus thermophilus''<br /> | ||
| - | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[3tve]], [[3tvh]], [[3uye]], [[3uyg]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[4dha]], [[4dhc]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[3zvp]], [[3v6w]], [[3v6x]], [[3zn9]], [[3zne]], [[4b8g]], [[4b8i]], [[4btd]], [[4ejb]], [[4ejc]], [[4g5l]], [[4g5n]], [[4g5u]], [[4g5w]], [[4jux]], [[4k0m]], [[4k0q]], [[4kbu]], [[4kbw]], [[4kcz]], [[4kd2]], [[4kd9]], [[4kdb]], [[4kdh]], [[4kdk]], [[4kfi]], [[4kfl]] - TtRPL2 in 50S subunit+5S RRNA+23S RRNA<br /> | ||
| - | [[3fin]] - TtRPL2 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br /> | ||
| - | [[2wwq]] – EcRPL2 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli'' | ||
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| - | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1pnu]], [[1pny]],[[3r8s]], [[3r8t]], [[3uos]], [[3uxq]], [[3uxr]], [[3sgf]], [[3j37]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]] - EcRPL2 in 50S subunit+5S RRNA+23S RRNA<br /> | ||
| - | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] - EcRPL2 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br /> | ||
| - | [[3kcr]] - EcRPL2 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br /> | ||
| - | [[3j01]] - EcRPL2 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase –Cryo-EM<br /> | ||
| - | [[2rdo]] - EcRPL2 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<br /> | ||
| - | [[3bbo]] - RPL2 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br /> | ||
| - | [[3iy9]] – RPL2 in 50S subunit – ''Leishmania taretolae''<br /> | ||
| - | [[2zjq]], [[2zjr]], [[1nkw]], [[4io9]], [[4ioa]], [[4ioc]] - DrRPL2 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br /> | ||
| - | [[1kqs]], [[1qvg]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA+CCA - ''Haloarcula marismortui''<br /> | ||
| - | [[1jj2]], [[1ffk]], [[3cc2]], [[2qa4]], [[1s72]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA<br /> | ||
| - | [[3cc7]], [[3cce]], [[3ccj]], [[3ccl]], [[3ccm]], [[3ccq]], [[3ccr]], [[3ccs]], [[3ccu]], [[3ccv]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA (mutant)<br /> | ||
| - | [[1vq4]], [[1vq5]], [[1vq7]], [[1vql]], [[1vqm]], [[1vqp]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA+transition state analog<br /> | ||
| - | [[1vq6]], [[1vqk]], [[1vqn]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA+ c-hpmn+CCA-Phe-caproic acid-biotin<br /> | ||
| - | [[1vqo]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA+ CCPMN<br /> | ||
| - | [[1yhq]], [[1yi2]], [[1yij]], [[1yjn]], [[1yjw]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA (mutant)+antibiotic<br /> | ||
| - | [[1yj9]] - HmRPL2P in 50S subunit (L22 mutant)+5S RRNA+23S RRNA<br /> | ||
| - | [[1qvf]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA + deacylated tRNA minihelix<br /> | ||
| - | [[1q86]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA+CCA-Phe-caproic acid-biotin<br /> | ||
| - | [[3j21]] – RPL2 in 50S subunit – ''Pyrococcus furiosus'' | ||
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| - | === L2 in 50S subunit + antibiotics === | ||
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| - | [[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - DrRPL2 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br /> | ||
| - | [[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] - TtRPL2 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br /> | ||
| - | [[2qam]], [[2qao]], [[2qoz]], [[2qp1]], [[2qba]], [[2qbc]], [[3ofc]], [[3ofz]], [[3ofq]], [[3ofr]], [[1vt2]], [[3orb]], [[3oas]], [[3oat]], [[4gar]], [[4gau]], [[4l6j]], [[4l6l]] - EcRPL2 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br /> | ||
| - | [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3i55]], [[3i56]], [[3g4s]], [[3g6e]], [[3g71]], [[2qex]], [[3cpw]], [[3cc4]], [[3cd6]], [[2otj]], [[2otl]], [[1yit]], [[1q7y]], [[1q81]], [[1q82]], [[1n8r]], [[1nji]], [[3cxc]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA+antibiotics <br /> | ||
| - | [[1m90]], [[3cma]], [[3cme]], [[1vq8]], [[1vq9]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin | ||
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| - | === L2 in 60S subunit === | ||
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| - | [[3jyw]] - RPL2 in 60S subunit – ''Thermomyces lanuginosus'' – Cryo-EM<br /> | ||
| - | [[3izr]] - RPL2 in 60S subunit – wheat – Cryo-EM<br /> | ||
| - | [[2ftc]] - RPL2 in 60S subunit+16S RRNA - bovine<br /> | ||
| - | [[1s1i]] - yRPL2 in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast<br /> | ||
| - | [[3o58]], [[3o5h]] - yRPL2 in 60S subunit+25S RRNA+5SRRNA+5.8RRNA | ||
=== L2 in part of the large ribosomal subunit === | === L2 in part of the large ribosomal subunit === | ||
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[[1c04]] – HmRPL2P+RPL6+RPL11+RPS14+23S RRNA fragment | [[1c04]] – HmRPL2P+RPL6+RPL11+RPS14+23S RRNA fragment | ||
| - | === L2 in large + small ribosomal subunit === | ||
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| - | [[1ml5]] - EcRPL2 in 50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – EM | ||
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| - | === L2 in 50S subunit + ribosome releasing factor (RRF) === | ||
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| - | [[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL2 in 50S subunit+5S RRNA+23S RRNA+RRF | ||
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| - | === L2 in 50S subunit + various proteins === | ||
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| - | [[2vhm]] - EcRPL2 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br /> | ||
| - | [[2j28]] - EcRPL2 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br /> | ||
| - | [[1w2b]] - HmRPL2P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal | ||
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| - | ===L2 in 60S subunit + various proteins=== | ||
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| - | [[4b6a]] – yRPL2 in 60S subunit +25S RRNA+5SRRNA + P0 + P1 + P2 + ARX1 | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 11:33, 23 April 2014
Image:RPL2.png
Crystal Structure of Ribosomal protein L2 from Thermus thermophilus (2xg0, chain D)
Ribosomal protein L2 (RPL2) is one of the 34 proteins which belong to the of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is required for the association of the 30S and 50S subunits and is involved in the binding of tRNA at the A- and P-sites. In the archaea like in Haloarcula marismortui, the L2 is called L2P (RPL2P). The images at the left and at the right correspond to one representative RPL2, i.e. the crystal structure of Ribosomal protein L2 from Thermus thermophilus (2xg0, chain D).
Contents |
3D Structures of Ribosomal protein L2
Updated on 23-April-2014
RPL2
1rl2 – RPL2 – Geobacillus stearothermophilus
L2 in part of the large ribosomal subunit
487d – RPL2+RPL1+RPL6+RPL9+RPL11+RPL14+RPL25 - Cryo-EM
1c04 – HmRPL2P+RPL6+RPL11+RPS14+23S RRNA fragment
