Ribosomal protein L22
From Proteopedia
| Line 17: | Line 17: | ||
===L22 in 50S subunit+RNA=== | ===L22 in 50S subunit+RNA=== | ||
| - | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL22 in 50S subunit+RNA fragments<br /> | + | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]], [[4byc]], [[4bye]] – TtRPL22 in 50S subunit+RNA fragments<br /> |
| - | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]] - TtRPL22 in 50S subunit+5S RRNA+23S RRNA<br /> | + | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]], [[4btd]], [[4kfi]], [[4kfl]], [[4kbu]], [[4kbw]], [[4kcz]], [[4kd2]], [[4kd9]], [[4kdb]], [[4kdh]], [[4kdk]], [[4k0m]], [[4k0q]], [[4jux]], [[4ejb]], [[4ejc]], [[3v6x]], [[3v6w]], [[4b8g]], [[4b8i]], [[3zn9]], [[3zne]], [[4g5l]], [[4g5n]], [[4g5u]], [[4g5w]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[4dha]], [[4dhc]], [[4abs]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[3uye]], [[3uyg]], [[3tve]], [[3tvh]], [[3uxq]], [[3uxr]], [[3zvp]] - TtRPL22 in 50S subunit+5S RRNA+23S RRNA<br /> |
[[2wwq]] – EcRPL22 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br /> | [[2wwq]] – EcRPL22 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br /> | ||
| - | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny ]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA<br /> | + | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3j4x]], [[3j50]], [[3j51]], [[3j52]], [[3j54]], [[3j56]], [[3j58]], [[3j5a]], [[3j5c]], [[3j5e]], [[3j5g]], [[3j5i]], [[3j5k]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]], [[3uos]], [[3sgf]], [[3r8s]], [[3r8t]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA<br /> |
| - | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM | + | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3j37]], [[3j19]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3izu]], [[3izt]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br /> |
| - | + | ||
[[3bbo]] - RPL22 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br /> | [[3bbo]] - RPL22 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br /> | ||
[[2zjq]], [[2zjr]], [[1nkw]] - DrRPL22 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br /> | [[2zjq]], [[2zjr]], [[1nkw]] - DrRPL22 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br /> | ||
[[1kqs]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+CCA - ''Haloarcula marismortui''<br /> | [[1kqs]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+CCA - ''Haloarcula marismortui''<br /> | ||
[[1jj2]], [[1ffk]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA<br /> | [[1jj2]], [[1ffk]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA<br /> | ||
| - | [[1yj9]] - HmRPL22P (mutant) in 50S subunit+5S RRNA+23S RRNA | + | [[1yj9]] - HmRPL22P (mutant) in 50S subunit+5S RRNA+23S RRNA<br /> |
| + | [[3j3w]], [[3j3v]] – RPL22 in 50S subunit+ 23S RRNA – ''Bacillus subtilis'' – Cryo EM<br /> | ||
===L22 in 50S subunit + antibiotics=== | ===L22 in 50S subunit + antibiotics=== | ||
| - | [[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - DrRPL22 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+ | + | [[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]], [[4io9]], [[4ioa]], [[4ioc]] - DrRPL22 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+antibiotics<br /> |
[[1ond]] - DrRPL22 + DrRPL32 +23S RRNA +antibiotic<br /> | [[1ond]] - DrRPL22 + DrRPL32 +23S RRNA +antibiotic<br /> | ||
| - | [[1j5a]], [[1jzx]], [[1jzy]], [[1jzz]], [[1k01]] - DrRPL22 + DrRPL4 + DrRPL32 +23S RRNA + | + | [[1j5a]], [[1jzx]], [[1jzy]], [[1jzz]], [[1k01]] - DrRPL22 + DrRPL4 + DrRPL32 +23S RRNA +antibiotics<br /> |
| - | [[2qam]], [[2qao]], [[2qba]], [[2qbc]], [[2qoz]], [[2qp1]], [[3ofc]], [[3ofz]], [[3ofr]], [[3orb]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+ | + | [[2qam]], [[2qao]], [[2qba]], [[2qbc]], [[2qoz]], [[2qp1]], [[3ofc]], [[3ofz]], [[3ofr]], [[3orb]], [[4gar]], [[4gau]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+antibiotics<br /> |
| - | [[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] - TtRPL22 in 50S subunit+5S RRNA+23S RRNA+ | + | [[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]], [[4l6l]], [[4l6j]] - TtRPL22 in 50S subunit+5S RRNA+23S RRNA+antibiotics<br /> |
| - | [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3cxc]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+ | + | [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3cxc]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+antibiotics<br /> |
[[1m90]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin | [[1m90]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin | ||
| Line 48: | Line 48: | ||
[[2vhm]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br /> | [[2vhm]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br /> | ||
[[2j28]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br /> | [[2j28]] - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br /> | ||
| + | [[3j01]], [[3kcr]] – EcRPL22 in 50S subunit+5S RRNA+23S RRNA+ preprotein translocase<br /> | ||
[[1w2b]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal | [[1w2b]] - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal | ||
| Line 54: | Line 55: | ||
[[3o5h]], [[3o58]] - yRPL22 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast<br /> | [[3o5h]], [[3o58]] - yRPL22 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast<br /> | ||
[[2ftc]] - RPL22 in 60S subunit+16S RRNA – Cryo EM – bovine<br /> | [[2ftc]] - RPL22 in 60S subunit+16S RRNA – Cryo EM – bovine<br /> | ||
| - | [[3izr]] – wRPL22 in the 60S subunit – wheat | + | [[3izr]] – wRPL22 in the 60S subunit – wheat <br /> |
| + | [[4a18]], [[4a19]], [[4a1a]], [[4a1c]] - RPL22 in 60S subunit+ 26S RRNA + EIF-6 – ''Tetrahymena thermophila''<br /> | ||
| + | [[3j39]] - RPL22 in 60S subunit+ P0 – ''Drosophila melanogaster'' – Cryo EM<br /> | ||
| + | [[3j3b] - RPL22 in 60S subunit+ P0 – human – Cryo EM<br /> | ||
===L22 in large + small ribosomal subunit=== | ===L22 in large + small ribosomal subunit=== | ||
Revision as of 09:47, 13 November 2013
Ribosomal protein L22 (RPL22) is one of the 34 proteins which belong to the of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. RPL22 binds to 23S RRNA.
Contents |
3D Structures of Ribosomal protein L22
Updated on 13-November-2013
RPL22
1i4j, 1bxe – TtRPL22 (mutant) - Thermus thermophilus
L22 in 50S subunit+RNA
2xg0, 2xg2, 3kir, 3kit, 3kiw, 3kiy, 4byc, 4bye – TtRPL22 in 50S subunit+RNA fragments
2x9s, 2x9u, 3kni, 3knk, 3knm, 3kno, 2wrj, 2wrl, 2wro, 2wrr, 3hux, 3huz, 2wh2, 2wh4, 2wdi, 2wdj, 2wdl, 2wdn, 1vsp, 2v47 , 2v49, 1vsa, 2hgj, 2hgq, 2hgu, 2j01, 2j03, 1yl3, 3mrz, 3ms1, 3i8f, 3i8i, 3i9c, 3i9e, 3f1f, 3f1h, 3d5b, 3d5d, 2b66, 2b9n, 2b9p, 1giy, 2y0v, 2y0x, 2y0z, 2y11, 2y13, 2y15, 2y17, 2y19, 3pyo, 3pyr, 3pyt, 3pyv, 2xtg, 2xux, 2xqe, 4btd, 4kfi, 4kfl, 4kbu, 4kbw, 4kcz, 4kd2, 4kd9, 4kdb, 4kdh, 4kdk, 4k0m, 4k0q, 4jux, 4ejb, 4ejc, 3v6x, 3v6w, 4b8g, 4b8i, 3zn9, 3zne, 4g5l, 4g5n, 4g5u, 4g5w, 3v23, 3v25, 3v27, 3v29, 3v2d, 3v2f, 4dha, 4dhc, 4abs, 3uz1, 3uz2, 3uz8, 3uz9, 3uzf, 3uzh, 3uzk, 3uzn, 3uye, 3uyg, 3tve, 3tvh, 3uxq, 3uxr, 3zvp - TtRPL22 in 50S subunit+5S RRNA+23S RRNA
2wwq – EcRPL22 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli
3i1n, 3i1p, 3i1r, 3i1t, 3i20, 3i22, 3e1b, 3e1d, 3df2, 3df4, 2vhn, 2qov, 2qox, 2i2t, 2i2v, 1vs6, 1vs8, 2aw4, 2awb, 3oas, 3oat, 3ofd, 3og0, 3ofq, 1vt2, 1vor, 1vou, 1vow, 1voy, 1vp0, 1pnu, 1pny, 3j4x, 3j50, 3j51, 3j52, 3j54, 3j56, 3j58, 3j5a, 3j5c, 3j5e, 3j5g, 3j5i, 3j5k, 4kix, 4kiz, 4kj1, 4kj3, 4kj5, 4kj7, 4kj9, 4kjb, 3uos, 3sgf, 3r8s, 3r8t - EcRPL22 in 50S subunit+5S RRNA+23S RRNA
3fik, 2gya, 2gyc, 3bbx, 1p85, 1p86, 3j37, 3j19, 3j0t, 3j0w, 3j0y, 3j11, 3j12, 3j14, 3izu, 3izt - EcRPL22 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM
3bbo - RPL22 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach
2zjq, 2zjr, 1nkw - DrRPL22 in 50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans
1kqs - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+CCA - Haloarcula marismortui
1jj2, 1ffk - HmRPL22P in 50S subunit+5S RRNA+23S RRNA
1yj9 - HmRPL22P (mutant) in 50S subunit+5S RRNA+23S RRNA
3j3w, 3j3v – RPL22 in 50S subunit+ 23S RRNA – Bacillus subtilis – Cryo EM
L22 in 50S subunit + antibiotics
3dll, 2zjp, 3cf5, 1xbp, 1sm1, 1nwx, 1nwy, 3pio, 3pip, 4io9, 4ioa, 4ioc - DrRPL22 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+antibiotics
1ond - DrRPL22 + DrRPL32 +23S RRNA +antibiotic
1j5a, 1jzx, 1jzy, 1jzz, 1k01 - DrRPL22 + DrRPL4 + DrRPL32 +23S RRNA +antibiotics
2qam, 2qao, 2qba, 2qbc, 2qoz, 2qp1, 3ofc, 3ofz, 3ofr, 3orb, 4gar, 4gau - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+antibiotics
3oh5, 3oh7, 3ohj, 3ohk, 3ohz, 3oi1, 3oi3, 3oi5, 4l6l, 4l6j - TtRPL22 in 50S subunit+5S RRNA+23S RRNA+antibiotics
1k73, 1kc8, 1k8a, 1k9m, 1kd1, 1m1k, 3cxc - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+antibiotics
1m90 - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin
L22 in 50S subunit + ribosome releasing factor (RRF)
2qbe, 2qbg, 2qbi, 2qbk, 2z4l, 2z4n - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+RRF
2rdo - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM
L22 in 50S subunit + various proteins
2vhm - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix
2j28 - EcRPL22 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM
3j01, 3kcr – EcRPL22 in 50S subunit+5S RRNA+23S RRNA+ preprotein translocase
1w2b - HmRPL22P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal
L22 in the 60S subunit
3o5h, 3o58 - yRPL22 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast
2ftc - RPL22 in 60S subunit+16S RRNA – Cryo EM – bovine
3izr – wRPL22 in the 60S subunit – wheat
4a18, 4a19, 4a1a, 4a1c - RPL22 in 60S subunit+ 26S RRNA + EIF-6 – Tetrahymena thermophila
3j39 - RPL22 in 60S subunit+ P0 – Drosophila melanogaster – Cryo EM
[[3j3b] - RPL22 in 60S subunit+ P0 – human – Cryo EM
L22 in large + small ribosomal subunit
1ml5 - EcRPL22 in 50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – EM
