4kr5

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{{STRUCTURE_4kr5| PDB=4kr5 | SCENE= }}
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==Crystal structure of Lactococcus lactis GlnP substrate binding domain 2 (SBD2) in open conformation==
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===Crystal structure of Lactococcus lactis GlnP substrate binding domain 2 (SBD2) in open conformation===
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<StructureSection load='4kr5' size='340' side='right' caption='[[4kr5]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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{{ABSTRACT_PUBMED_23994008}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4kr5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lacla Lacla]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KR5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KR5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=P33:3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL'>P33</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG0:2-(2-METHOXYETHOXY)ETHANOL'>PG0</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4kqp|4kqp]], [[4kpt|4kpt]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glnP, L165, LL1759 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272623 LACLA])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kr5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kr5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kr5 RCSB], [http://www.ebi.ac.uk/pdbsum/4kr5 PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The ATP-binding cassette (ABC) transporter GlnPQ is an essential uptake system for amino acids in gram-positive pathogens and related nonpathogenic bacteria. The transporter has tandem substrate-binding domains (SBDs) fused to each transmembrane domain, giving rise to four SBDs per functional transporter complex. We have determined the crystal structures and ligand-binding properties of the SBDs of GlnPQ from Enterococcus faecalis, Streptococcus pneumoniae, and Lactococcus lactis. The tandem SBDs differ in substrate specificity and affinity, allowing cells to efficiently accumulate different amino acids via a single ABC transporter. The combined structural, functional, and thermodynamic analysis revealed the roles of individual residues in determining the substrate affinity. We succeeded in converting a low-affinity SBD into a high-affinity receptor and vice versa. Our data indicate that a small number of residues that reside in the binding pocket constitute the major affinity determinants of the SBDs.
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==About this Structure==
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Functional Diversity of Tandem Substrate-Binding Domains in ABC Transporters from Pathogenic Bacteria.,Fulyani F, Schuurman-Wolters GK, Zagar AV, Guskov A, Slotboom DJ, Poolman B Structure. 2013 Aug 28. pii: S0969-2126(13)00270-0. doi:, 10.1016/j.str.2013.07.020. PMID:23994008<ref>PMID:23994008</ref>
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[[4kr5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lacla Lacla]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KR5 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:023994008</ref><references group="xtra"/><references/>
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</div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Lacla]]
[[Category: Lacla]]
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[[Category: Guskov, A.]]
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[[Category: Guskov, A]]
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[[Category: Poolman, B.]]
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[[Category: Poolman, B]]
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[[Category: Schuurman-Wolters, G K.]]
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[[Category: Schuurman-Wolters, G K]]
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[[Category: Slotboom, D J.]]
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[[Category: Slotboom, D J]]
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[[Category: Zagar, A Vujicic.]]
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[[Category: Zagar, A Vujicic]]
[[Category: Amino acid transport]]
[[Category: Amino acid transport]]
[[Category: Extracellular]]
[[Category: Extracellular]]
[[Category: Glutamine/glutamic acid binding]]
[[Category: Glutamine/glutamic acid binding]]
[[Category: Transport protein]]
[[Category: Transport protein]]

Revision as of 14:53, 21 December 2014

Crystal structure of Lactococcus lactis GlnP substrate binding domain 2 (SBD2) in open conformation

4kr5, resolution 1.50Å

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