This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Fibronectin

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 51: Line 51:
[[1fbr]] - hFn 4-5FnI - NMR<br />
[[1fbr]] - hFn 4-5FnI - NMR<br />
[[2rky]], [[2rl0]] – hFn 4-5FnI+Fn binding peptide<br />
[[2rky]], [[2rl0]] – hFn 4-5FnI+Fn binding peptide<br />
-
[[2rkz]], [[3cal]] - hFn 2-3FnI+Fn binding peptide<br />
+
[[2rkz]], [[3cal]], [[3zrz]] - hFn 2-3FnI+Fn binding peptide<br />
[[2cg6]], [[2cg7]] - hFn 2-3FnI<br />
[[2cg6]], [[2cg7]] - hFn 2-3FnI<br />
[[2cku]] - hFn 2-3FnI – NMR<br />
[[2cku]] - hFn 2-3FnI – NMR<br />

Revision as of 10:15, 10 March 2014

Image:1fbr.png
Crystal Structure of Fibronectin 4-5FnI fragment 1fbr

Template:STRUCTURE 3m7p


















Fibronectin (Fn) is a glycoprotein which binds extracellular matrix components like integrin, collagen, fibrin and others. It is a component of cell adhesion. It is a dimer of homologous monomers linked by S-S bond. Each monomer contains 3 types of modules: FnI, FnII and FnIII. Each module contains several numbered protein binding domains, i.e., 6FnI+1-2FnII is the gelatin binding domain (GBD). The images at the left and at the right correspond to one representative Fn, i.e. the crystal structure of human Fibronectin 4-5FnI fragment (1fbr).

Contents

3D Structures of Fibronectin

Updated on 10-March-2014

Fn module FnI

3m7p – hFn GBD – human
1e8b, 1e88, 1qo6 - hFn GBD – NMR
3gxe, 3ejh – hFn 8-9FnI+collagen alpha-1
1fbr - hFn 4-5FnI - NMR
2rky, 2rl0 – hFn 4-5FnI+Fn binding peptide
2rkz, 3cal, 3zrz - hFn 2-3FnI+Fn binding peptide
2cg6, 2cg7 - hFn 2-3FnI
2cku - hFn 2-3FnI – NMR
1o9a - hFn 1-2FnI+B3 from FNBB – NMR
2ec3 – hFn 11FnI – NMR
3r8q – hFn 12-14FnI
1qgb – hFn FnI N-terminal - NMR
2ck2 – hFn (mutant) core swapped
1j8k – hFn extra domain 2 – NMR
1fnh – hFn heparin and integrin binding domains
2qbw, 3ch8 – hFn-PDZ fusion
4gh7 – hFn residues 1173-1448 + Neutrophil gelatinase-associated lipocalin

Fn module FnII

2fn2 – hFn 2FnII – NMR


Fn module FnIII

1q38, 1x3d, 1x4x, 1x5x - hFn FnIII – NMR
2h41, 2h45 – hFn 2FnIII – NMR
1oww - hFn 1FnIII – NMR
2ha1 - hFn 1-2FnIII – NMR
2crm - hFn 4FnIII – NMR
2crz - hFn 5FnIII – NMR
1fna, 1ttf, 1ttg – hFn 10FnIII
2ocf - hFn 10FnIII+estrogen receptor ligand-binding domain
1fnf – hFn 7-10FnIII
2fnb – hFn FnIII ed-b domain – NMR
1mfn, 2mfn – Fn 9-10FnIII – mouse - NMR
2vmg, 2vmi - Fn FnIII carbohydrate-binding domain – Clostridium perfringens


Fn module FnI+FnII

3mql – hFn 6FnI+2FnII+7FnI

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

Personal tools