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4k0e

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{{STRUCTURE_4k0e| PDB=4k0e | SCENE= }}
 
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===X-ray crystal structure of a heavy metal efflux pump, crystal form II===
 
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{{ABSTRACT_PUBMED_24173033}}
 
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==About this Structure==
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==X-ray crystal structure of a heavy metal efflux pump, crystal form II==
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[[4k0e]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Cupriavidus_metallidurans_ch34 Cupriavidus metallidurans ch34]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K0E OCA].
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<StructureSection load='4k0e' size='340' side='right' caption='[[4k0e]], [[Resolution|resolution]] 3.71&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4k0e]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Cupriavidus_metallidurans_ch34 Cupriavidus metallidurans ch34]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K0E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4K0E FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4k0j|4k0j]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">zneA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=266264 Cupriavidus metallidurans CH34])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4k0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k0e OCA], [http://pdbe.org/4k0e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4k0e RCSB], [http://www.ebi.ac.uk/pdbsum/4k0e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4k0e ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Efflux pumps belonging to the ubiquitous resistance-nodulation-cell division (RND) superfamily transport substrates out of cells by coupling proton conduction across the membrane to a conformationally driven pumping cycle. The heavy metal-resistant bacteria Cupriavidus metallidurans CH34 relies notably on as many as 12 heavy metal efflux pumps of the RND superfamily. Here we show that C. metallidurans CH34 ZneA is a proton driven efflux pump specific for Zn(II), and that transport of substrates through the transmembrane domain may be electrogenic. We report two X-ray crystal structures of ZneA in intermediate transport conformations, at 3.0 and 3.7 A resolution. The trimeric ZneA structures capture protomer conformations that differ in the spatial arrangement and Zn(II) occupancies at a proximal and a distal substrate binding site. Structural comparison shows that transport of substrates through a tunnel that links the two binding sites, toward an exit portal, is mediated by the conformation of a short 14-aa loop. Taken together, the ZneA structures presented here provide mechanistic insights into the conformational changes required for substrate efflux by RND superfamily transporters.
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==Reference==
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Structures of intermediate transport states of ZneA, a Zn(II)/proton antiporter.,Pak JE, Ekende EN, Kifle EG, O'Connell JD 3rd, De Angelis F, Tessema MB, Derfoufi KM, Robles-Colmenares Y, Robbins RA, Goormaghtigh E, Vandenbussche G, Stroud RM Proc Natl Acad Sci U S A. 2013 Nov 12;110(46):18484-9. doi:, 10.1073/pnas.1318705110. Epub 2013 Oct 30. PMID:24173033<ref>PMID:24173033</ref>
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<ref group="xtra">PMID:024173033</ref><references group="xtra"/><references/>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4k0e" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Cupriavidus metallidurans ch34]]
[[Category: Cupriavidus metallidurans ch34]]
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[[Category: CSMP, Center for Structures of Membrane Proteins.]]
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[[Category: CSMP, Center for Structures of Membrane Proteins]]
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[[Category: Ekende, E Ngonlong.]]
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[[Category: Ekende, E Ngonlong]]
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[[Category: Pak, J E.]]
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[[Category: Pak, J E]]
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[[Category: Stroud, R M.]]
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[[Category: Stroud, R M]]
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[[Category: Vandenbussche, G.]]
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[[Category: Vandenbussche, G]]
[[Category: Center for structures of membrane protein]]
[[Category: Center for structures of membrane protein]]
[[Category: Csmp]]
[[Category: Csmp]]

Revision as of 09:59, 5 August 2016

X-ray crystal structure of a heavy metal efflux pump, crystal form II

4k0e, resolution 3.71Å

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