This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4jk0
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU== | |
| - | + | <StructureSection load='4jk0' size='340' side='right' caption='[[4jk0]], [[Resolution|resolution]] 2.30Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | ==Function== | + | <table><tr><td colspan='2'>[[4jk0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Tbsv Tbsv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JK0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JK0 FirstGlance]. <br> |
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4jgn|4jgn]], [[4j39|4j39]], [[1r9f|1r9f]], [[4e48|4e48]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ORF4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=12145 TBSV])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jk0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jk0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jk0 RCSB], [http://www.ebi.ac.uk/pdbsum/4jk0 PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
[[http://www.uniprot.org/uniprot/P19_TBSVK P19_TBSVK]] Viral suppressor of RNA silencing which binds specifically to silencing RNAs (siRNAs). Acts as a molecular caliper to specifically select siRNAs based on the length of the duplex region of the RNA (By similarity). | [[http://www.uniprot.org/uniprot/P19_TBSVK P19_TBSVK]] Viral suppressor of RNA silencing which binds specifically to silencing RNAs (siRNAs). Acts as a molecular caliper to specifically select siRNAs based on the length of the duplex region of the RNA (By similarity). | ||
| - | == | + | ==See Also== |
| - | [[ | + | *[[P19|P19]] |
| - | [[Category: Katorcha, E | + | *[[RNA silencing suppressor|RNA silencing suppressor]] |
| - | [[Category: Malinina, L | + | __TOC__ |
| - | [[Category: Popov, A N | + | </StructureSection> |
| - | [[Category: Tamjar, J | + | [[Category: Tbsv]] |
| + | [[Category: Katorcha, E]] | ||
| + | [[Category: Malinina, L]] | ||
| + | [[Category: Popov, A N]] | ||
| + | [[Category: Tamjar, J]] | ||
[[Category: Dimer]] | [[Category: Dimer]] | ||
[[Category: Protein-rna complex]] | [[Category: Protein-rna complex]] | ||
Revision as of 19:46, 25 December 2014
Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU
| |||||||||||
