4bvo
From Proteopedia
(Difference between revisions)
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- | {{STRUCTURE_4bvo| PDB=4bvo | SCENE= }} | ||
- | ===Legionella pneumophila NTPDase1 crystal form VI (part-open) in complex with polytungstate POM-1=== | ||
- | {{ABSTRACT_PUBMED_24699658}} | ||
- | == | + | ==Legionella pneumophila NTPDase1 crystal form VI (part-open) in complex with polytungstate POM-1== |
- | [[4bvo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33152 Atcc 33152]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BVO OCA]. | + | <StructureSection load='4bvo' size='340' side='right' caption='[[4bvo]], [[Resolution|resolution]] 1.70Å' scene=''> |
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4bvo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33152 Atcc 33152]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BVO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BVO FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=E43:12-POLYTUNGSTATE'>E43</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4bvp|4bvp]]</td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Apyrase Apyrase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.5 3.6.1.5] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bvo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bvo OCA], [http://pdbe.org/4bvo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4bvo RCSB], [http://www.ebi.ac.uk/pdbsum/4bvo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4bvo ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Nucleoside triphosphate diphosphohydrolases (NTPDases) are secreted or membrane-bound ectonucleotidases that hydrolyze the anhydride bonds of nucleoside triphosphates and nucleoside diphosphates. Mammalian cell-surface NTPDase enzymes are inhibited by various polyoxometallates. Here, the structures of NTPDase1 from the bacterium Legionella pneumophila (LpNTPDase1) in complex with the dodecatungstate POM-1, decavanadate and octamolybdate/heptamolybdate are described. The metal clusters are bound at different sites but always in a highly ordered fashion via electrostatic interactions and hydrogen bonds. For octamolybdate, covalent interactions after oxygen ligand exchange by a serine and histidine side chain are also observed. The potential inhibitory mechanism and the use of the metal clusters as phasing tools for new NTPDase structures are discussed. The binding mode of a tartrate ion at the catalytic centre suggests novel strategies for the structure-based design of NTPDase inhibitors, and the observation of the enzyme in an intermediate open state contributes to our understanding of NTPDase enzyme dynamics. | ||
- | + | Structures of Legionella pneumophila NTPDase1 in complex with polyoxometallates.,Zebisch M, Krauss M, Schafer P, Strater N Acta Crystallogr D Biol Crystallogr. 2014 Apr 1;70(Pt 4):1147-54. doi:, 10.1107/S1399004714001916. Epub 2014 Mar 21. PMID:24699658<ref>PMID:24699658</ref> | |
- | <ref | + | |
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 4bvo" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Ectonucleoside triphosphate diphosphohydrolase|Ectonucleoside triphosphate diphosphohydrolase]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Apyrase]] | [[Category: Apyrase]] | ||
[[Category: Atcc 33152]] | [[Category: Atcc 33152]] | ||
- | [[Category: Schaefer, P | + | [[Category: Schaefer, P]] |
- | [[Category: Straeter, N | + | [[Category: Straeter, N]] |
- | [[Category: Zebisch, M | + | [[Category: Zebisch, M]] |
- | + | ||
[[Category: Atpase]] | [[Category: Atpase]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] |
Revision as of 19:17, 4 August 2016
Legionella pneumophila NTPDase1 crystal form VI (part-open) in complex with polytungstate POM-1
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Categories: Apyrase | Atcc 33152 | Schaefer, P | Straeter, N | Zebisch, M | Atpase | Hydrolase | Keggin | Metal cluster | Purinergic signalling | Twinning