3j6q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
+
==Identification of the active sites in the methyltransferases of a transcribing dsRNA virus==
 +
<StructureSection load='3j6q' size='340' side='right' caption='[[3j6q]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3j6q]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Bombyx_mori_cypovirus_1 Bombyx mori cypovirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3J6Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3J6Q FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
 +
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=GPL:LYSINE+GUANOSINE-5-MONOPHOSPHATE'>GPL</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3j6q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3j6q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3j6q RCSB], [http://www.ebi.ac.uk/pdbsum/3j6q PDBsum]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Many double-stranded RNA (dsRNA) viruses are capable of transcribing and capping RNA within a stable icosahedral viral capsid. The turret of turreted dsRNA viruses belonging to the family Reoviridae is formed by five copies of the turret protein, which contains domains with both 7-N-methyltransferase and 2'-O-methyltransferase activities, and serves to catalyze the methylation reactions during RNA capping. Cypovirus of the family Reoviridae provides a good model system for studying the methylation reactions in dsRNA viruses. Here, we present the structure of a transcribing cypovirus to a resolution of ~3.8A by cryo-electron microscopy. The binding sites for both S-adenosyl-L-methionine and RNA in the two methyltransferases of the turret were identified. Structural analysis of the turret in complex with RNA revealed a pathway through which the RNA molecule reaches the active sites of the two methyltransferases before it is released into the cytoplasm. The pathway shows that RNA capping reactions occur in the active sites of different turret protein monomers, suggesting that RNA capping requires concerted efforts by at least three turret protein monomers. Thus, the turret structure provides novel insights into the precise mechanisms of RNA methylation.
-
The entry 3j6q is ON HOLD until Paper Publication
+
Identification of the active sites in the methyltransferases of a transcribing dsRNA virus.,Zhu B, Yang C, Liu H, Cheng L, Song F, Zeng S, Huang X, Ji G, Zhu P J Mol Biol. 2014 May 29;426(11):2167-74. doi: 10.1016/j.jmb.2014.03.013. Epub, 2014 Mar 30. PMID:24690366<ref>PMID:24690366</ref>
-
Authors: Zhu, B., Yang, C., Liu, H., Cheng, L., Song, F., Zeng, S., Huang, X., Ji, G., Zhu, P.
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
Description: Identification of the active sites in the methyltransferases of a transcribing dsRNA virus
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bombyx mori cypovirus 1]]
 +
[[Category: Cheng, L.]]
 +
[[Category: Huang, X.]]
 +
[[Category: Ji, G.]]
 +
[[Category: Liu, H.]]
 +
[[Category: Song, F.]]
 +
[[Category: Yang, C.]]
 +
[[Category: Zeng, S.]]
 +
[[Category: Zhu, B.]]
 +
[[Category: Zhu, P.]]
 +
[[Category: Dsrna virus]]
 +
[[Category: Reoviridae]]
 +
[[Category: Rna capping]]
 +
[[Category: Rna methyltransferase]]
 +
[[Category: Virus]]

Revision as of 07:43, 8 October 2014

Identification of the active sites in the methyltransferases of a transcribing dsRNA virus

3j6q, resolution 3.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools