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User:A. Rahim Zalal/Sandbox 1
From Proteopedia
(Difference between revisions)
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The sequence for histone H2A type 1 (human) is presented here<ref>PMID:12408966</ref>: | The sequence for histone H2A type 1 (human) is presented here<ref>PMID:12408966</ref>: | ||
| + | <pre> | ||
10 20 30 40 50 60 | 10 20 30 40 50 60 | ||
MSGRGKQGGK ARAKAKTRSS RAGLQFPVGR VHRLLRKGNY AERVGAGAPV YLAAVLEYLT | MSGRGKQGGK ARAKAKTRSS RAGLQFPVGR VHRLLRKGNY AERVGAGAPV YLAAVLEYLT | ||
| Line 23: | Line 24: | ||
130 | 130 | ||
| - | TESHHKAKGK | + | TESHHKAKGK</pre> |
===Coding DNA Sequence=== | ===Coding DNA Sequence=== | ||
The coding DNA sequence for the H2A type 1 subunit (human)<ref>PMID:1916825</ref>: | The coding DNA sequence for the H2A type 1 subunit (human)<ref>PMID:1916825</ref>: | ||
| - | >ENA|AAA63191|AAA63191.1 Homo sapiens (human) histone H2A.1 : Location:1..393 | + | |
| + | <pre>ENA|AAA63191|AAA63191.1 Homo sapiens (human) histone H2A.1 : Location:1..393 | ||
ATGTCTGGACGTGGAAAGCAAGGCGGCAAAGCTCGGGCAAAAGCTAAAACGCGTTCTTCC | ATGTCTGGACGTGGAAAGCAAGGCGGCAAAGCTCGGGCAAAAGCTAAAACGCGTTCTTCC | ||
AGGGCCGGTCTTCAGTTTCCAGTTGGCCGTGTGCACCGCCTCCTCCGCAAAGGCAACTAC | AGGGCCGGTCTTCAGTTTCCAGTTGGCCGTGTGCACCGCCTCCTCCGCAAAGGCAACTAC | ||
| Line 34: | Line 36: | ||
CCGCGCCACCTGCAGCTAGCCATCCGCAACGACGAGGAGCTAAATAAGCTTCTAGGTCGC | CCGCGCCACCTGCAGCTAGCCATCCGCAACGACGAGGAGCTAAATAAGCTTCTAGGTCGC | ||
GTGACCATCGCGCAGGGCGGTGTCCTGCCCAACATCCAGGCCGTATTGCTGCCTAAGAAG | GTGACCATCGCGCAGGGCGGTGTCCTGCCCAACATCCAGGCCGTATTGCTGCCTAAGAAG | ||
| - | ACGGAGAGCCACCATAAGGCCAAGGGCAAGTGA | + | ACGGAGAGCCACCATAAGGCCAAGGGCAAGTGA</pre> |
== Mechanism == | == Mechanism == | ||
Revision as of 17:00, 2 May 2014
Histone (H2A)
Holder text
Contents |
Structure
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Function
Sequence
Protein Primary Sequence
The sequence for histone H2A type 1 (human) is presented here[3]:
10 20 30 40 50 60
MSGRGKQGGK ARAKAKTRSS RAGLQFPVGR VHRLLRKGNY AERVGAGAPV YLAAVLEYLT
70 80 90 100 110 120
AEILELAGNA ARDNKKTRII PRHLQLAIRN DEELNKLLGK VTIAQGGVLP NIQAVLLPKK
130
TESHHKAKGK
Coding DNA Sequence
The coding DNA sequence for the H2A type 1 subunit (human)[4]:
ENA|AAA63191|AAA63191.1 Homo sapiens (human) histone H2A.1 : Location:1..393 ATGTCTGGACGTGGAAAGCAAGGCGGCAAAGCTCGGGCAAAAGCTAAAACGCGTTCTTCC AGGGCCGGTCTTCAGTTTCCAGTTGGCCGTGTGCACCGCCTCCTCCGCAAAGGCAACTAC TCCGAACGAGTCGGGGCCGGCGCTCCAGTGTACCTGGCAGCGGTGCTGGAATATCTGACG GCCGAGATCTTAGAGCTAGCTGGCAACGCGGCTCGCGACAATAAGAAGACCCGCATCATC CCGCGCCACCTGCAGCTAGCCATCCGCAACGACGAGGAGCTAAATAAGCTTCTAGGTCGC GTGACCATCGCGCAGGGCGGTGTCCTGCCCAACATCCAGGCCGTATTGCTGCCTAAGAAG ACGGAGAGCCACCATAAGGCCAAGGGCAAGTGA
Mechanism
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
- ↑ Marzluff WF, Gongidi P, Woods KR, Jin J, Maltais LJ. The human and mouse replication-dependent histone genes. Genomics. 2002 Nov;80(5):487-98. PMID:12408966
- ↑ Albig W, Kardalinou E, Drabent B, Zimmer A, Doenecke D. Isolation and characterization of two human H1 histone genes within clusters of core histone genes. Genomics. 1991 Aug;10(4):940-8. PMID:1916825
