4d0t

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m (Protected "4d0t" [edit=sysop:move=sysop])
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'''Unreleased structure'''
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==GalNAc-T2 crystal soaked with UDP-GalNAc, EA2 peptide and manganese==
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<StructureSection load='4d0t' size='340' side='right' caption='[[4d0t]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
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The entry 4d0t is ON HOLD until Apr 30 2016
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4d0t]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D0T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D0T FirstGlance]. <br>
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Authors: Lira-Navarrete, E., Iglesias-Fernandez, J., Zandberg, W.F., Companon, I., Kong, Y., Corzana, F., Pinto, B.M., Clausen, H., Peregrina, J.M., Vocadlo, D., Rovira, C., Hurtado-Guerrero, R.
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene>, <scene name='pdbligand=UD2:URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE'>UD2</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene><br>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4d0z|4d0z]], [[4d11|4d11]]</td></tr>
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Description: GalNAc-T2 crystal soaked with UDP-GalNAc, EA2 peptide and manganese
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Polypeptide_N-acetylgalactosaminyltransferase Polypeptide N-acetylgalactosaminyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.41 2.4.1.41] </span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d0t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d0t OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4d0t RCSB], [http://www.ebi.ac.uk/pdbsum/4d0t PDBsum]</span></td></tr>
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<table>
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__TOC__
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</StructureSection>
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[[Category: Polypeptide N-acetylgalactosaminyltransferase]]
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[[Category: Synthetic construct]]
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[[Category: Clausen, H.]]
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[[Category: Companon, I.]]
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[[Category: Corzana, F.]]
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[[Category: Hurtado-Guerrero, R.]]
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[[Category: Iglesias-Fernandez, J.]]
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[[Category: Kong, Y.]]
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[[Category: Lira-Navarrete, E.]]
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[[Category: Peregrina, J M.]]
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[[Category: Pinto, B M.]]
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[[Category: Rovira, C.]]
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[[Category: Vocadlo, D.]]
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[[Category: Zandberg, W F.]]
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[[Category: Acetamido group]]
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[[Category: Bi-bi kinetic mechanism]]
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[[Category: Protein x-ray crystallography]]
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[[Category: Qm/mm metadynamic]]
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[[Category: Retaining galnac-t2]]
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[[Category: Substrate specificity]]
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[[Category: Substrate-guided sni-type reaction]]
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[[Category: Transferase]]

Revision as of 10:00, 28 May 2014

GalNAc-T2 crystal soaked with UDP-GalNAc, EA2 peptide and manganese

4d0t, resolution 2.45Å

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