This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2yli
From Proteopedia
(Difference between revisions)
| Line 2: | Line 2: | ||
<StructureSection load='2yli' size='340' side='right' caption='[[2yli]], [[Resolution|resolution]] 1.45Å' scene=''> | <StructureSection load='2yli' size='340' side='right' caption='[[2yli]], [[Resolution|resolution]] 1.45Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2yli]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLI OCA]. <br> | + | <table><tr><td colspan='2'>[[2yli]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YLI FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr> | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2yl3|2yl3]], [[2xm0|2xm0]], [[2xlh|2xlh]], [[1cgo|1cgo]], [[2ykz|2ykz]], [[2xm4|2xm4]], [[1e86|1e86]], [[2xl6|2xl6]], [[2yl0|2yl0]], [[1e85|1e85]], [[1cgn|1cgn]], [[2xlm|2xlm]], [[2yl1|2yl1]], [[2xld|2xld]], [[2xle|2xle]], [[2yl7|2yl7]], [[1e83|1e83]], [[2xl8|2xl8]], [[2xlw|2xlw]], [[1e84|1e84]], [[2xlv|2xlv]], [[2xlo|2xlo]], [[2ylg|2ylg]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2yl3|2yl3]], [[2xm0|2xm0]], [[2xlh|2xlh]], [[1cgo|1cgo]], [[2ykz|2ykz]], [[2xm4|2xm4]], [[1e86|1e86]], [[2xl6|2xl6]], [[2yl0|2yl0]], [[1e85|1e85]], [[1cgn|1cgn]], [[2xlm|2xlm]], [[2yl1|2yl1]], [[2xld|2xld]], [[2xle|2xle]], [[2yl7|2yl7]], [[1e83|1e83]], [[2xl8|2xl8]], [[2xlw|2xlw]], [[1e84|1e84]], [[2xlv|2xlv]], [[2xlo|2xlo]], [[2ylg|2ylg]]</td></tr> |
| - | <tr | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yli OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yli RCSB], [http://www.ebi.ac.uk/pdbsum/2yli PDBsum]</span></td></tr> |
| - | + | </table> | |
| - | <table> | + | == Function == |
| + | [[http://www.uniprot.org/uniprot/CYCP_ALCXX CYCP_ALCXX]] Cytochrome c' is the most widely occurring bacterial c-type cytochrome. Cytochromes c' are high-spin proteins and the heme has no sixth ligand. Their exact function is not known. | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 15: | Line 16: | ||
Carbon monoxide poisoning is prevented by the energy costs of conformational changes in gas-binding haemproteins.,Antonyuk SV, Rustage N, Petersen CA, Arnst JL, Heyes DJ, Sharma R, Berry NG, Scrutton NS, Eady RR, Andrew CR, Hasnain SS Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):15780-5. Epub 2011 Sep 7. PMID:21900609<ref>PMID:21900609</ref> | Carbon monoxide poisoning is prevented by the energy costs of conformational changes in gas-binding haemproteins.,Antonyuk SV, Rustage N, Petersen CA, Arnst JL, Heyes DJ, Sharma R, Berry NG, Scrutton NS, Eady RR, Andrew CR, Hasnain SS Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):15780-5. Epub 2011 Sep 7. PMID:21900609<ref>PMID:21900609</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
== References == | == References == | ||
| Line 22: | Line 23: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Achromobacter xylosoxidans]] | [[Category: Achromobacter xylosoxidans]] | ||
| - | [[Category: Antonyuk, S V | + | [[Category: Antonyuk, S V]] |
| - | [[Category: Eady, R R | + | [[Category: Eady, R R]] |
| - | [[Category: Hasnain, S S | + | [[Category: Hasnain, S S]] |
[[Category: 4-helix bundle]] | [[Category: 4-helix bundle]] | ||
[[Category: Electron transport]] | [[Category: Electron transport]] | ||
[[Category: Haemoprotein]] | [[Category: Haemoprotein]] | ||
Revision as of 16:08, 24 December 2014
RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS IN ITS FERROUS FORM AT 1.45 A
| |||||||||||
