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2xyu

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<StructureSection load='2xyu' size='340' side='right' caption='[[2xyu]], [[Resolution|resolution]] 2.12&Aring;' scene=''>
<StructureSection load='2xyu' size='340' side='right' caption='[[2xyu]], [[Resolution|resolution]] 2.12&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2xyu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYU OCA]. <br>
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<table><tr><td colspan='2'>[[2xyu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XYU FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=Q9G:5-(5-FLUORO-2-METHYLPHENYL)-6,7,8,9-TETRAHYDRO-3H-PYRAZOLO[3,4-C]ISOQUINOLIN-1-AMINE'>Q9G</scene><br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=Q9G:5-(5-FLUORO-2-METHYLPHENYL)-6,7,8,9-TETRAHYDRO-3H-PYRAZOLO[3,4-C]ISOQUINOLIN-1-AMINE'>Q9G</scene></td></tr>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1b0x|1b0x]]</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1b0x|1b0x]]</td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Receptor_protein-tyrosine_kinase Receptor protein-tyrosine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 2.7.10.1] </span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xyu RCSB], [http://www.ebi.ac.uk/pdbsum/2xyu PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xyu RCSB], [http://www.ebi.ac.uk/pdbsum/2xyu PDBsum]</span></td></tr>
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<table>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/EPHA4_MOUSE EPHA4_MOUSE]] Receptor tyrosine kinase which binds membrane-bound ephrin family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Highly promiscuous, it has the unique property among Eph receptors to bind and to be physiologically activated by both GPI-anchored ephrin-A and transmembrane ephrin-B ligands including EFNA1 and EFNB3. Upon activation by ephrin ligands, modulates cell morphology and integrin-dependent cell adhesion through regulation of the Rac, Rap and Rho GTPases activity. Plays an important role in the development of the nervous system controlling different steps of axonal guidance including the establishment of the corticospinal projections. May also control the segregation of motor and sensory axons during neuromuscular circuit development. Beside its role in axonal guidance plays a role in synaptic plasticity. Activated by EFNA1 phosphorylates CDK5 at 'Tyr-15' which in turn phosphorylates NGEF regulating RHOA and dendritic spine morphogenesis. In the nervous system, plays also a role in repair after injury preventing axonal regeneration and in angiogenesis playing a role in central nervous system vascular formation. Additionally, its promiscuity makes it available to participate in a variety of cell-cell signaling regulating for instance the development of the thymic epithelium.<ref>PMID:9789074</ref> <ref>PMID:15537875</ref> <ref>PMID:16802330</ref> <ref>PMID:16818734</ref> <ref>PMID:17719550</ref> <ref>PMID:18094260</ref> <ref>PMID:17143272</ref> <ref>PMID:17785183</ref> <ref>PMID:18403711</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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Fragment based lead discovery of small molecule inhibitors for the EPHA4 receptor tyrosine kinase.,van Linden OP, Farenc C, Zoutman WH, Hameetman L, Wijtmans M, Leurs R, Tensen CP, Siegal G, de Esch IJ Eur J Med Chem. 2011 Nov 18. PMID:22137457<ref>PMID:22137457</ref>
Fragment based lead discovery of small molecule inhibitors for the EPHA4 receptor tyrosine kinase.,van Linden OP, Farenc C, Zoutman WH, Hameetman L, Wijtmans M, Leurs R, Tensen CP, Siegal G, de Esch IJ Eur J Med Chem. 2011 Nov 18. PMID:22137457<ref>PMID:22137457</ref>
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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==See Also==
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*[[Ephrin receptor|Ephrin receptor]]
== References ==
== References ==
<references/>
<references/>
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[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Receptor protein-tyrosine kinase]]
[[Category: Receptor protein-tyrosine kinase]]
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[[Category: Celie, P H.N.]]
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[[Category: Celie, P H.N]]
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[[Category: Farenc, C J.A.]]
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[[Category: Farenc, C J.A]]
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[[Category: Siegal, G.]]
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[[Category: Siegal, G]]
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[[Category: Vanlinden, O P.J.]]
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[[Category: Vanlinden, O P.J]]
[[Category: Signaling protein]]
[[Category: Signaling protein]]
[[Category: Transferase]]
[[Category: Transferase]]

Revision as of 21:42, 24 December 2014

Crystal structure of EphA4 kinase domain in complex with VUF 12058

2xyu, resolution 2.12Å

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