This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4l8q
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4l8q]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Canavalia_grandiflora Canavalia grandiflora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L8Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4L8Q FirstGlance]. <br> | <table><tr><td colspan='2'>[[4l8q]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Canavalia_grandiflora Canavalia grandiflora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L8Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4L8Q FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XMM:(2R,3S,4S,5S,6R)-2-(5-BROMO-4-CHLORO-1H-INDOL-3-YLOXY)-TETRAHYDRO-6-(HYDROXYMETHYL)-2H-PYRAN-3,4,5-TRIOL'>XMM</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XMM:(2R,3S,4S,5S,6R)-2-(5-BROMO-4-CHLORO-1H-INDOL-3-YLOXY)-TETRAHYDRO-6-(HYDROXYMETHYL)-2H-PYRAN-3,4,5-TRIOL'>XMM</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cwm|2cwm]], [[2d7f|2d7f]], [[3ju9|3ju9]], [[3a0k|3a0k]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cwm|2cwm]], [[2d7f|2d7f]], [[3ju9|3ju9]], [[3a0k|3a0k]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4l8q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l8q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4l8q RCSB], [http://www.ebi.ac.uk/pdbsum/4l8q PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4l8q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l8q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4l8q RCSB], [http://www.ebi.ac.uk/pdbsum/4l8q PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 13: | Line 13: | ||
Vasorelaxant activity of Canavalia grandiflora seed lectin: A structural analysis.,Barroso-Neto IL, Simoes RC, Rocha BA, Bezerra MJ, Pereira-Junior FN, Silva Osterne VJ, Nascimento KS, Nagano CS, Delatorre P, Pereira MG, Freitas Pires A, Sampaio AH, Assreuy AM, Cavada BS Arch Biochem Biophys. 2014 Feb 1;543:31-9. doi: 10.1016/j.abb.2013.12.006. Epub, 2013 Dec 17. PMID:24361256<ref>PMID:24361256</ref> | Vasorelaxant activity of Canavalia grandiflora seed lectin: A structural analysis.,Barroso-Neto IL, Simoes RC, Rocha BA, Bezerra MJ, Pereira-Junior FN, Silva Osterne VJ, Nascimento KS, Nagano CS, Delatorre P, Pereira MG, Freitas Pires A, Sampaio AH, Assreuy AM, Cavada BS Arch Biochem Biophys. 2014 Feb 1;543:31-9. doi: 10.1016/j.abb.2013.12.006. Epub, 2013 Dec 17. PMID:24361256<ref>PMID:24361256</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
== References == | == References == | ||
| Line 20: | Line 20: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Canavalia grandiflora]] | [[Category: Canavalia grandiflora]] | ||
| - | [[Category: Barroso-Neto, I L | + | [[Category: Barroso-Neto, I L]] |
| - | [[Category: Bezerra, M J.B | + | [[Category: Bezerra, M J.B]] |
| - | [[Category: Cavada, B S | + | [[Category: Cavada, B S]] |
| - | [[Category: Delatorre, P | + | [[Category: Delatorre, P]] |
| - | [[Category: Nagano, C S | + | [[Category: Nagano, C S]] |
| - | [[Category: Nascimento, K S | + | [[Category: Nascimento, K S]] |
| - | [[Category: Osterne, V J.S | + | [[Category: Osterne, V J.S]] |
| - | [[Category: Pereira-Junior, F N | + | [[Category: Pereira-Junior, F N]] |
| - | [[Category: Rocha, B A.M | + | [[Category: Rocha, B A.M]] |
| - | [[Category: Sampaio, A H | + | [[Category: Sampaio, A H]] |
| - | [[Category: Simoes, R C | + | [[Category: Simoes, R C]] |
[[Category: Carbohydrate/sugar binding]] | [[Category: Carbohydrate/sugar binding]] | ||
[[Category: Jelly roll domain]] | [[Category: Jelly roll domain]] | ||
Revision as of 08:54, 5 January 2015
Crystal structure of Canavalia grandiflora seed lectin complexed with X-Man.
| |||||||||||
Categories: Canavalia grandiflora | Barroso-Neto, I L | Bezerra, M J.B | Cavada, B S | Delatorre, P | Nagano, C S | Nascimento, K S | Osterne, V J.S | Pereira-Junior, F N | Rocha, B A.M | Sampaio, A H | Simoes, R C | Carbohydrate/sugar binding | Jelly roll domain | Lectin | Plant protein | Protein body | Sugar binding protein
