3r93
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3r93]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R93 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R93 FirstGlance]. <br> | <table><tr><td colspan='2'>[[3r93]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R93 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R93 FirstGlance]. <br> | ||
- | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> |
- | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene></td></tr> | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene></td></tr> |
- | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3lwe|3lwe]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3lwe|3lwe]]</td></tr> |
- | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MPHOSPH8, MPP8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MPHOSPH8, MPP8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr> |
- | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r93 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r93 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r93 RCSB], [http://www.ebi.ac.uk/pdbsum/3r93 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r93 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r93 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r93 RCSB], [http://www.ebi.ac.uk/pdbsum/3r93 PDBsum]</span></td></tr> |
- | <table> | + | </table> |
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/MPP8_HUMAN MPP8_HUMAN]] Involved in transcriptional regulation. Specifically recognizes and binds methylated 'Lys-9' of histone H3 (H3K9me) and promotes DNA methylation by recruiting DNMT3A to target CpG sites; these can be situated within the coding region of the gene. Mediates down-regulation of CDH1 expression.<ref>PMID:20871592</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.,Li J, Li Z, Ruan J, Xu C, Tong Y, Pan PW, Tempel W, Crombet L, Min J, Zang J PLoS One. 2011;6(10):e25104. Epub 2011 Oct 12. PMID:22022377<ref>PMID:22022377</ref> | Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.,Li J, Li Z, Ruan J, Xu C, Tong Y, Pan PW, Tempel W, Crombet L, Min J, Zang J PLoS One. 2011;6(10):e25104. Epub 2011 Oct 12. PMID:22022377<ref>PMID:22022377</ref> | ||
- | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
== References == | == References == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: Crombet, L | + | [[Category: Crombet, L]] |
- | [[Category: Li, J | + | [[Category: Li, J]] |
- | [[Category: Li, Z | + | [[Category: Li, Z]] |
- | [[Category: Min, J | + | [[Category: Min, J]] |
- | [[Category: Pan, P W | + | [[Category: Pan, P W]] |
- | [[Category: Ruan, J | + | [[Category: Ruan, J]] |
- | [[Category: Tempel, W | + | [[Category: Tempel, W]] |
- | [[Category: Tong, Y | + | [[Category: Tong, Y]] |
- | [[Category: Xu, C | + | [[Category: Xu, C]] |
- | [[Category: Zang, J | + | [[Category: Zang, J]] |
[[Category: Cell cycle]] | [[Category: Cell cycle]] | ||
[[Category: Chromodomain]] | [[Category: Chromodomain]] | ||
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[[Category: Sgc]] | [[Category: Sgc]] | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
- | [[Category: Structural genomics consortium]] |
Revision as of 14:58, 24 December 2014
Crystal structure of the chromo domain of M-phase phosphoprotein 8 bound to H3K9Me3 peptide
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Categories: Homo sapiens | Crombet, L | Li, J | Li, Z | Min, J | Pan, P W | Ruan, J | Tempel, W | Tong, Y | Xu, C | Zang, J | Cell cycle | Chromodomain | Epigenetic | M-phase | Sgc | Structural genomic