This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3ugm
From Proteopedia
(Difference between revisions)
| Line 2: | Line 2: | ||
<StructureSection load='3ugm' size='340' side='right' caption='[[3ugm]], [[Resolution|resolution]] 3.00Å' scene=''> | <StructureSection load='3ugm' size='340' side='right' caption='[[3ugm]], [[Resolution|resolution]] 3.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ugm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae Xanthomonas oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UGM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3UGM FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3ugm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae Xanthomonas oryzae]. The December 2014 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''TAL Effectors'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2014_12 10.2210/rcsb_pdb/mom_2014_12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UGM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3UGM FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pthXo1, PXO_00227 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=347 Xanthomonas oryzae])</td></tr> | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pthXo1, PXO_00227 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=347 Xanthomonas oryzae])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ugm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ugm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ugm RCSB], [http://www.ebi.ac.uk/pdbsum/3ugm PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ugm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ugm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ugm RCSB], [http://www.ebi.ac.uk/pdbsum/3ugm PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 12: | Line 12: | ||
The Crystal Structure of TAL Effector PthXo1 Bound to Its DNA Target.,Mak AN, Bradley P, Cernadas RA, Bogdanove AJ, Stoddard BL Science. 2012 Jan 5. PMID:22223736<ref>PMID:22223736</ref> | The Crystal Structure of TAL Effector PthXo1 Bound to Its DNA Target.,Mak AN, Bradley P, Cernadas RA, Bogdanove AJ, Stoddard BL Science. 2012 Jan 5. PMID:22223736<ref>PMID:22223736</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
| Line 21: | Line 21: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: RCSB PDB Molecule of the Month]] | ||
| + | [[Category: TAL Effectors]] | ||
[[Category: Xanthomonas oryzae]] | [[Category: Xanthomonas oryzae]] | ||
| - | [[Category: Bogdanove, A J | + | [[Category: Bogdanove, A J]] |
| - | [[Category: Bradley, P | + | [[Category: Bradley, P]] |
| - | [[Category: Cernadas, R A | + | [[Category: Cernadas, R A]] |
| - | [[Category: Mak, A N.S | + | [[Category: Mak, A N.S]] |
| - | [[Category: Stoddard, B L | + | [[Category: Stoddard, B L]] |
[[Category: Dna binding protein]] | [[Category: Dna binding protein]] | ||
[[Category: Tal effector]] | [[Category: Tal effector]] | ||
[[Category: Transcription-dna complex]] | [[Category: Transcription-dna complex]] | ||
Revision as of 09:16, 4 January 2015
Structure of TAL effector PthXo1 bound to its DNA target
| |||||||||||

