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3tfx
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3tfx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TFX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3TFX FirstGlance]. <br> | <table><tr><td colspan='2'>[[3tfx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TFX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3TFX FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LBA1386, pyrF, pyrF/LBA1386 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1579 Lactobacillus acidophilus])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LBA1386, pyrF, pyrF/LBA1386 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1579 Lactobacillus acidophilus])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tfx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tfx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3tfx RCSB], [http://www.ebi.ac.uk/pdbsum/3tfx PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tfx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tfx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3tfx RCSB], [http://www.ebi.ac.uk/pdbsum/3tfx PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/PYRF_LACAC PYRF_LACAC]] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP) (By similarity). | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Lactobacillus acidophilus]] | [[Category: Lactobacillus acidophilus]] | ||
[[Category: Orotidine-5'-phosphate decarboxylase]] | [[Category: Orotidine-5'-phosphate decarboxylase]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Chamala, S | + | [[Category: Chamala, S]] |
| - | [[Category: Evans, B | + | [[Category: Evans, B]] |
| - | [[Category: Foti, R | + | [[Category: Foti, R]] |
| - | [[Category: Gizzi, A | + | [[Category: Gizzi, A]] |
| - | [[Category: Hillerich, B | + | [[Category: Hillerich, B]] |
| - | [[Category: Kar, A | + | [[Category: Kar, A]] |
| - | [[Category: LaFleur, J | + | [[Category: LaFleur, J]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Satyanarayana, L | + | [[Category: Satyanarayana, L]] |
| - | [[Category: Seidel, R | + | [[Category: Seidel, R]] |
| - | [[Category: Swaminathan, S | + | [[Category: Swaminathan, S]] |
| - | [[Category: Villigas, G | + | [[Category: Villigas, G]] |
| - | [[Category: Zencheck, W | + | [[Category: Zencheck, W]] |
| - | + | ||
[[Category: Decarboxylase lyase]] | [[Category: Decarboxylase lyase]] | ||
[[Category: Lyase]] | [[Category: Lyase]] | ||
| - | [[Category: New york structural genomics research consortium]] | ||
[[Category: Nysgrc]] | [[Category: Nysgrc]] | ||
[[Category: Psi-biology]] | [[Category: Psi-biology]] | ||
[[Category: Pyrimidine metabolism]] | [[Category: Pyrimidine metabolism]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Tim barrel fold]] | [[Category: Tim barrel fold]] | ||
[[Category: Ump biosynthesis via de novo pathway]] | [[Category: Ump biosynthesis via de novo pathway]] | ||
[[Category: Ump from orotate]] | [[Category: Ump from orotate]] | ||
Revision as of 13:35, 25 December 2014
Crystal structure of Orotidine 5'-phosphate decarboxylase from Lactobacillus acidophilus
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Categories: Lactobacillus acidophilus | Orotidine-5'-phosphate decarboxylase | Almo, S C | Chamala, S | Evans, B | Foti, R | Gizzi, A | Hillerich, B | Kar, A | LaFleur, J | Structural genomic | Satyanarayana, L | Seidel, R | Swaminathan, S | Villigas, G | Zencheck, W | Decarboxylase lyase | Lyase | Nysgrc | Psi-biology | Pyrimidine metabolism | Tim barrel fold | Ump biosynthesis via de novo pathway | Ump from orotate
