4d0x
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4d0x]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D0X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D0X FirstGlance]. <br> | <table><tr><td colspan='2'>[[4d0x]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D0X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D0X FirstGlance]. <br> | ||
- | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=953:5-(2-AMINOPYRIMIDIN-4-YL)-2-[2-CHLORO-5-(TRIFLUOROMETHYL)PHENYL]-1H-PYRROLE-3-CARBOXAMIDE'>953</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=953:5-(2-AMINOPYRIMIDIN-4-YL)-2-[2-CHLORO-5-(TRIFLUOROMETHYL)PHENYL]-1H-PYRROLE-3-CARBOXAMIDE'>953</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
- | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr> | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr> |
- | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4d0w|4d0w]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4d0w|4d0w]]</td></tr> |
- | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_protein-tyrosine_kinase Non-specific protein-tyrosine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.2 2.7.10.2] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_protein-tyrosine_kinase Non-specific protein-tyrosine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.2 2.7.10.2] </span></td></tr> |
- | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d0x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d0x OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4d0x RCSB], [http://www.ebi.ac.uk/pdbsum/4d0x PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d0x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d0x OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4d0x RCSB], [http://www.ebi.ac.uk/pdbsum/4d0x PDBsum]</span></td></tr> |
- | <table> | + | </table> |
== Disease == | == Disease == | ||
[[http://www.uniprot.org/uniprot/JAK2_HUMAN JAK2_HUMAN]] Note=Chromosomal aberrations involving JAK2 are found in both chronic and acute forms of eosinophilic, lymphoblastic and myeloid leukemia. Translocation t(8;9)(p22;p24) with PCM1 links the protein kinase domain of JAK2 to the major portion of PCM1. Translocation t(9;12)(p24;p13) with ETV6. Defects in JAK2 are a cause of susceptibility to Budd-Chiari syndrome (BDCHS) [MIM:[http://omim.org/entry/600880 600880]]. A syndrome caused by obstruction of hepatic venous outflow involving either the hepatic veins or the terminal segment of the inferior vena cava. Obstructions are generally caused by thrombosis and lead to hepatic congestion and ischemic necrosis. Clinical manifestations observed in the majority of patients include hepatomegaly, right upper quadrant pain and abdominal ascites. Budd-Chiari syndrome is associated with a combination of disease states including primary myeloproliferative syndromes and thrombophilia due to factor V Leiden, protein C deficiency and antithrombin III deficiency. Budd-Chiari syndrome is a rare but typical complication in patients with polycythemia vera. Defects in JAK2 are a cause of polycythemia vera (PV) [MIM:[http://omim.org/entry/263300 263300]]. A myeloproliferative disorder characterized by abnormal proliferation of all hematopoietic bone marrow elements, erythroid hyperplasia, an absolute increase in total blood volume, but also by myeloid leukocytosis, thrombocytosis and splenomegaly.<ref>PMID:15781101</ref> <ref>PMID:15793561</ref> <ref>PMID:15858187</ref> <ref>PMID:16603627</ref> Defects in JAK2 gene may be the cause of thrombocythemia type 3 (THCYT3) [MIM:[http://omim.org/entry/614521 614521]]. A myeloproliferative disorder characterized by elevated platelet levels due to sustained proliferation of megakaryocytes, and frequently lead to thrombotic and haemorrhagic complications.<ref>PMID:16325696</ref> <ref>PMID:22397670</ref> Defects in JAK2 are a cause of myelofibrosis (MYELOF) [MIM:[http://omim.org/entry/254450 254450]]. Myelofibrosis is a disorder characterized by replacement of the bone marrow by fibrous tissue, occurring in association with a myeloproliferative disorder. Clinical manifestations may include anemia, pallor, splenomegaly, hypermetabolic state, petechiae, ecchymosis, bleeding, lymphadenopathy, hepatomegaly, portal hypertension. Defects in JAK2 are a cause of acute myelogenous leukemia (AML) [MIM:[http://omim.org/entry/601626 601626]]. AML is a malignant disease in which hematopoietic precursors are arrested in an early stage of development.<ref>PMID:16247455</ref> | [[http://www.uniprot.org/uniprot/JAK2_HUMAN JAK2_HUMAN]] Note=Chromosomal aberrations involving JAK2 are found in both chronic and acute forms of eosinophilic, lymphoblastic and myeloid leukemia. Translocation t(8;9)(p22;p24) with PCM1 links the protein kinase domain of JAK2 to the major portion of PCM1. Translocation t(9;12)(p24;p13) with ETV6. Defects in JAK2 are a cause of susceptibility to Budd-Chiari syndrome (BDCHS) [MIM:[http://omim.org/entry/600880 600880]]. A syndrome caused by obstruction of hepatic venous outflow involving either the hepatic veins or the terminal segment of the inferior vena cava. Obstructions are generally caused by thrombosis and lead to hepatic congestion and ischemic necrosis. Clinical manifestations observed in the majority of patients include hepatomegaly, right upper quadrant pain and abdominal ascites. Budd-Chiari syndrome is associated with a combination of disease states including primary myeloproliferative syndromes and thrombophilia due to factor V Leiden, protein C deficiency and antithrombin III deficiency. Budd-Chiari syndrome is a rare but typical complication in patients with polycythemia vera. Defects in JAK2 are a cause of polycythemia vera (PV) [MIM:[http://omim.org/entry/263300 263300]]. A myeloproliferative disorder characterized by abnormal proliferation of all hematopoietic bone marrow elements, erythroid hyperplasia, an absolute increase in total blood volume, but also by myeloid leukocytosis, thrombocytosis and splenomegaly.<ref>PMID:15781101</ref> <ref>PMID:15793561</ref> <ref>PMID:15858187</ref> <ref>PMID:16603627</ref> Defects in JAK2 gene may be the cause of thrombocythemia type 3 (THCYT3) [MIM:[http://omim.org/entry/614521 614521]]. A myeloproliferative disorder characterized by elevated platelet levels due to sustained proliferation of megakaryocytes, and frequently lead to thrombotic and haemorrhagic complications.<ref>PMID:16325696</ref> <ref>PMID:22397670</ref> Defects in JAK2 are a cause of myelofibrosis (MYELOF) [MIM:[http://omim.org/entry/254450 254450]]. Myelofibrosis is a disorder characterized by replacement of the bone marrow by fibrous tissue, occurring in association with a myeloproliferative disorder. Clinical manifestations may include anemia, pallor, splenomegaly, hypermetabolic state, petechiae, ecchymosis, bleeding, lymphadenopathy, hepatomegaly, portal hypertension. Defects in JAK2 are a cause of acute myelogenous leukemia (AML) [MIM:[http://omim.org/entry/601626 601626]]. AML is a malignant disease in which hematopoietic precursors are arrested in an early stage of development.<ref>PMID:16247455</ref> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Non-specific protein-tyrosine kinase]] | [[Category: Non-specific protein-tyrosine kinase]] | ||
- | [[Category: Avanzi, N | + | [[Category: Avanzi, N]] |
- | [[Category: Ballinari, D | + | [[Category: Ballinari, D]] |
- | [[Category: Bandiera, T | + | [[Category: Bandiera, T]] |
- | [[Category: Bertrand, J | + | [[Category: Bertrand, J]] |
- | [[Category: Bindi, S | + | [[Category: Bindi, S]] |
- | [[Category: Brasca, M G | + | [[Category: Brasca, M G]] |
- | [[Category: Canevari, G | + | [[Category: Canevari, G]] |
- | [[Category: Carenzi, D | + | [[Category: Carenzi, D]] |
- | [[Category: Casero, D | + | [[Category: Casero, D]] |
- | [[Category: Ceriani, L | + | [[Category: Ceriani, L]] |
- | [[Category: Ciomei, M | + | [[Category: Ciomei, M]] |
- | [[Category: Cirla, A | + | [[Category: Cirla, A]] |
- | [[Category: Colombo, M | + | [[Category: Colombo, M]] |
- | [[Category: Cribioli, S | + | [[Category: Cribioli, S]] |
- | [[Category: Cristiani, C | + | [[Category: Cristiani, C]] |
- | [[Category: Donati, D | + | [[Category: Donati, D]] |
- | [[Category: Fachin, G | + | [[Category: Fachin, G]] |
- | [[Category: Fasolini, M | + | [[Category: Fasolini, M]] |
- | [[Category: Felder, E R | + | [[Category: Felder, E R]] |
- | [[Category: Galvani, A | + | [[Category: Galvani, A]] |
- | [[Category: Gnocchi, P | + | [[Category: Gnocchi, P]] |
- | [[Category: Isacchi, A | + | [[Category: Isacchi, A]] |
- | [[Category: Mirizzi, D | + | [[Category: Mirizzi, D]] |
- | [[Category: Motto, I | + | [[Category: Motto, I]] |
- | [[Category: Nesi, M | + | [[Category: Nesi, M]] |
- | [[Category: Panzeri, A | + | [[Category: Panzeri, A]] |
- | [[Category: Pesenti, E | + | [[Category: Pesenti, E]] |
- | [[Category: Vedova, F Della | + | [[Category: Vedova, F Della]] |
- | [[Category: Vianello, P | + | [[Category: Vianello, P]] |
[[Category: Anti-cancer agent]] | [[Category: Anti-cancer agent]] | ||
[[Category: Drug discovery]] | [[Category: Drug discovery]] |
Revision as of 10:08, 20 January 2015
Pyrrole-3-carboxamides as potent and selective JAK2 inhibitors
|
Categories: Non-specific protein-tyrosine kinase | Avanzi, N | Ballinari, D | Bandiera, T | Bertrand, J | Bindi, S | Brasca, M G | Canevari, G | Carenzi, D | Casero, D | Ceriani, L | Ciomei, M | Cirla, A | Colombo, M | Cribioli, S | Cristiani, C | Donati, D | Fachin, G | Fasolini, M | Felder, E R | Galvani, A | Gnocchi, P | Isacchi, A | Mirizzi, D | Motto, I | Nesi, M | Panzeri, A | Pesenti, E | Vedova, F Della | Vianello, P | Anti-cancer agent | Drug discovery | Polycythemia vera | Protein kinase inhibitor | Structure-activity relationship | Transferase | Tumour cell proliferation inhibition