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Flavodoxin

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{{#tree:id=OrganizedByTopic|openlevels=0|
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=== Apo FDX ===
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* Apo FDX
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[[2kqu]], [[1dx9]] – AnFDX (mutant) apo – ''Anabanea'' – NMR<br />
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**[[2kqu]], [[1dx9]] – AnFDX (mutant) apo – ''Anabanea'' – NMR<br />
-
[[2bmv]] – HpFDX apo - ''Helicobacter pylori''<br />
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**[[2bmv]] – HpFDX apo - ''Helicobacter pylori''<br />
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[[3d7n]] – FDX apo – ''Agrobacterium tumefaciens''<br />
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**[[3d7n]] – FDX apo – ''Agrobacterium tumefaciens''<br />
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[[2rg1]] - EcFDX WrbA apo - ''Escherichia coli''<br />
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**[[2rg1]] - EcFDX WrbA apo - ''Escherichia coli''<br />
-
[[2hna]], [[2hnb]] – EcFDX apo – NMR<br />
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**[[2hna]], [[2hnb]] – EcFDX apo – NMR<br />
-
[[1qhe]], [[1ftg]] – nFDX apo – Nostoc<br />
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**[[1qhe]], [[1ftg]] – nFDX apo – Nostoc<br />
-
[[1bu5]] – DvFDX apo+riboflavin - ''Desulfovibrio vulgaris''<br />
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**[[1bu5]] – DvFDX apo+riboflavin - ''Desulfovibrio vulgaris''<br />
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=== FDX containing FMN oxidized (quinone) ===
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* FDX containing FMN oxidized (quinone)
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[[3f6r]], [[3f6s]], [[3kap]] – DdFDX-ox - ''Desulfovibrio desulfuricans''<br />
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**[[3f6r]], [[3f6s]], [[3kap]] – DdFDX-ox - ''Desulfovibrio desulfuricans''<br />
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[[4heq]] - FDX-ox – ''Desulfovibrio gigas'' <br />
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**[[4heq]] - FDX-ox – ''Desulfovibrio gigas'' <br />
-
[[1ag9]] – EcFDX-ox<br />
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**[[1ag9]] – EcFDX-ox<br />
-
[[1flv]] – nFDX-ox<br />
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**[[1flv]] – nFDX-ox<br />
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[[1xyy]], [[1j9g]], [[1c7f]], [[1akr]], [[1akt]], [[1akw]] – DvFDX-ox (mutant)<br />
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**[[1xyy]], [[1j9g]], [[1c7f]], [[1akr]], [[1akt]], [[1akw]] – DvFDX-ox (mutant)<br />
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[[2fx2]], [[3fx2]], [[4fx2]], [[5fx2]], [[1fx1]] – DvFDX-ox<br />
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**[[2fx2]], [[3fx2]], [[4fx2]], [[5fx2]], [[1fx1]] – DvFDX-ox<br />
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[[1czk]], [[1czr]] – SeFDX-ox (mutant) - ''Synechococcus elongates''<br />
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**[[1czk]], [[1czr]] – SeFDX-ox (mutant) - ''Synechococcus elongates''<br />
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[[1czn]] – SeFDX-ox I<br />
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**[[1czn]] – SeFDX-ox I<br />
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[[1ofv]] – SeFDX-ox II<br />
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**[[1ofv]] – SeFDX-ox II<br />
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[[1czu]], [[1d03]] - SeFDX-ox II<br />
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**[[1czu]], [[1d03]] - SeFDX-ox II<br />
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[[2fdx]], [[1fld]], [[1fvx]], [[2fax]], [[3nll]], [[4nll]], [[4nul]], [[5nll]] – CbFDX-ox (mutant) - ''Clostridium beijerinckii''<br />
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**[[2fdx]], [[1fld]], [[1fvx]], [[2fax]], [[3nll]], [[4nll]], [[4nul]], [[5nll]] – CbFDX-ox (mutant) - ''Clostridium beijerinckii''<br />
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[[2fcr]] – FDX-ox – ''Chondrus crispus''<br />
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**[[2fcr]] – FDX-ox – ''Chondrus crispus''<br />
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[[1fue]] – HpFDX-ox<br />
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**[[1fue]] – HpFDX-ox<br />
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[[4j8p]] - FDX-ox – ''Bacterioides uniformis'' <br />
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**[[4j8p]] - FDX-ox – ''Bacterioides uniformis'' <br />
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=== FDX containing FMNH (semiquinone) ===
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* FDX containing FMNH (semiquinone)
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[[2x2o]], [[2x2p]] – NrdI-sq – ''Bacillus cereus''<br />
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**[[2x2o]], [[2x2p]] – NrdI-sq – ''Bacillus cereus''<br />
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[[3kaq]], [[3f90]] – DdFDX-sq <br />
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**[[3kaq]], [[3f90]] – DdFDX-sq <br />
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[[1xt6]], [[1wsw]], [[1xyv]], [[1akv]], [[1wsb]] - DvFDX-sq (mutant)<br />
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**[[1xt6]], [[1wsw]], [[1xyv]], [[1akv]], [[1wsb]] - DvFDX-sq (mutant)<br />
-
[[1czh]], [[1czl]] - SeFDX-sq (mutant)<br />
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**[[1czh]], [[1czl]] - SeFDX-sq (mutant)<br />
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[[2fox]], [[5nul]]– CbFDX-sq<br />
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**[[2fox]], [[5nul]]– CbFDX-sq<br />
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=== FDX containing FMNH2 (hydroquinone) ===
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* FDX containing FMNH2 (hydroquinone)
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[[2fz5]] – FDX-red – ''Megasphaera elsdenii'' – NMR<br />
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**[[2fz5]] – FDX-red – ''Megasphaera elsdenii'' – NMR<br />
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[[1c7e]], [[1aku]], [[1akq]] - DvFDX-red (mutant)<br />
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**[[1c7e]], [[1aku]], [[1akq]] - DvFDX-red (mutant)<br />
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[[1czo]] - SeFDX-red (mutant)<br />
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**[[1czo]] - SeFDX-red (mutant)<br />
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[[1d04]] – SeFDX-red<br />
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**[[1d04]] – SeFDX-red<br />
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[[1fla]], [[1fln]], [[2flv]], [[2fvx]], [[5ull]], [[6nul]] – CbFDX-red (mutant)<br />
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**[[1fla]], [[1fln]], [[2flv]], [[2fvx]], [[5ull]], [[6nul]] – CbFDX-red (mutant)<br />
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=== Other FDX ===
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=== Other FDX
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[[3esx]], [[3esy]], [[3esz]], [[2v5u]], [[2v5v]], [[1obo]], [[1obv]] - AnFDX (mutant)<br />
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[[1rcf]], [[1flv]] - AnFDX<br />
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[[2wc1]] – FDX – ''Rhodobacter capsulatus''<br />
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[[2w5u]] – HpFDX+C3 inhibitor 1fue - HpFDX<br />
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[[2kaq]] – DdFDX <br />
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[[2r97]], [[2r96]] – EcFDX WrbA<br />
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[[1ahn]] – EcFDX<br />
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[[2q9u]] – FDX di-iron – ''Giardia intestinalis''<br />
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-
[[2ark]] – FDX – ''Aquifex aeolicus''<br />
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[[1yob]] – FDX II – ''Azotobacter vinelandii''<br />
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[[1j9e]], [[1f4p]], [[1i10]], [[1azl]] – DvFDX (mutant)<br />
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-
[[1j8q]] - DvFDX<br />
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**[[3esx]], [[3esy]], [[3esz]], [[2v5u]], [[2v5v]], [[1obo]], [[1obv]] - AnFDX (mutant)<br />
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**[[1rcf]], [[1flv]] - AnFDX<br />
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**[[2wc1]] – FDX – ''Rhodobacter capsulatus''<br />
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**[[2w5u]] – HpFDX+C3 inhibitor 1fue - HpFDX<br />
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**[[2kaq]] – DdFDX <br />
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**[[2r97]], [[2r96]] – EcFDX WrbA<br />
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**[[1ahn]] – EcFDX<br />
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**[[2q9u]] – FDX di-iron – ''Giardia intestinalis''<br />
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**[[2ark]] – FDX – ''Aquifex aeolicus''<br />
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**[[1yob]] – FDX II – ''Azotobacter vinelandii''<br />
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**[[1j9e]], [[1f4p]], [[1i10]], [[1azl]] – DvFDX (mutant)<br />
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**[[1j8q]] - DvFDX<br />
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}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 12:37, 25 November 2014

Template:STRUCTURE 2bmv

Flavodoxin (FDX) is a bacterial protein which contains flavin mononucleotide (FMN) or flavin adenine dinucleotide (FAD). It participates in nitrogen metabolism and reduces N2 to NH3 while changing from its oxidized quinone state FDX-ox via semiquinone FDX-sq to its reduced hydroquinone state FDX-red. NrdI is a FDX which is involved in ribonucleotide reduction. WrbA (Tryptophan Repressor-Binding Protein) is also FDX. In E. coli there are 2 distinct FDX I and II. The space filling objects are of chloride ion and benzamidine.

3D Structures of Flavodoxin

Updated on 25-November-2014

=== Other FDX

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Jaime Prilusky

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