This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4k2a
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4k2a]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K2A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4K2A FirstGlance]. <br> | <table><tr><td colspan='2'>[[4k2a]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K2A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4K2A FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a2m|3a2m]], [[2bn6|2bn6]], [[1cij|1cij]], [[2qvb|2qvb]], [[1cv2|1cv2]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a2m|3a2m]], [[2bn6|2bn6]], [[1cij|1cij]], [[2qvb|2qvb]], [[1cv2|1cv2]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Haloalkane_dehalogenase Haloalkane dehalogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.8.1.5 3.8.1.5] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Haloalkane_dehalogenase Haloalkane dehalogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.8.1.5 3.8.1.5] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4k2a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k2a OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4k2a RCSB], [http://www.ebi.ac.uk/pdbsum/4k2a PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4k2a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k2a OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4k2a RCSB], [http://www.ebi.ac.uk/pdbsum/4k2a PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/E2RV62_BRAEL E2RV62_BRAEL]] Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons (By similarity).[HAMAP-Rule:MF_01231] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 24: | Line 26: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Haloalkane dehalogenase]] | [[Category: Haloalkane dehalogenase]] | ||
| - | [[Category: Chaloupkova, R | + | [[Category: Chaloupkova, R]] |
| - | [[Category: Damborsky, J | + | [[Category: Damborsky, J]] |
| - | [[Category: Koudelakova, T | + | [[Category: Koudelakova, T]] |
| - | [[Category: Kuty, M | + | [[Category: Kuty, M]] |
| - | [[Category: Mozga, T | + | [[Category: Mozga, T]] |
| - | [[Category: Nagata, Y | + | [[Category: Nagata, Y]] |
| - | [[Category: Prudnikova, T | + | [[Category: Prudnikova, T]] |
| - | [[Category: Rezacova, P | + | [[Category: Rezacova, P]] |
| - | [[Category: S2F, Structure 2.Function Project | + | [[Category: S2F, Structure 2.Function Project]] |
| - | [[Category: Sato, Y | + | [[Category: Sato, Y]] |
| - | [[Category: Smatanova, I Kuta | + | [[Category: Smatanova, I Kuta]] |
[[Category: Dimer catalytic pentad]] | [[Category: Dimer catalytic pentad]] | ||
[[Category: Enzyme function initiative]] | [[Category: Enzyme function initiative]] | ||
Revision as of 21:57, 25 December 2014
Crystal structure of haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94
| |||||||||||
Categories: Haloalkane dehalogenase | Chaloupkova, R | Damborsky, J | Koudelakova, T | Kuty, M | Mozga, T | Nagata, Y | Prudnikova, T | Rezacova, P | S2F, Structure 2.Function Project | Sato, Y | Smatanova, I Kuta | Dimer catalytic pentad | Enzyme function initiative | Halogen binding | Hydrolase | S2f | Structural genomic | Structure 2 function project | Two domain organization
