This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1ud6
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1ud6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp._ksm-k38 Bacillus sp. ksm-k38]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD6 FirstGlance]. <br> | <table><tr><td colspan='2'>[[1ud6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp._ksm-k38 Bacillus sp. ksm-k38]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD6 FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ud2|1ud2]], [[1ud3|1ud3]], [[1ud4|1ud4]], [[1ud5|1ud5]], [[1ud8|1ud8]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ud2|1ud2]], [[1ud3|1ud3]], [[1ud4|1ud4]], [[1ud5|1ud5]], [[1ud8|1ud8]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ud6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ud6 RCSB], [http://www.ebi.ac.uk/pdbsum/1ud6 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ud6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ud6 RCSB], [http://www.ebi.ac.uk/pdbsum/1ud6 PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 29: | Line 29: | ||
==See Also== | ==See Also== | ||
*[[Amylase|Amylase]] | *[[Amylase|Amylase]] | ||
| + | *[[User:Gabriel Pons/Sandbox 2|User:Gabriel Pons/Sandbox 2]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
| Line 35: | Line 36: | ||
[[Category: Alpha-amylase]] | [[Category: Alpha-amylase]] | ||
[[Category: Bacillus sp. ksm-k38]] | [[Category: Bacillus sp. ksm-k38]] | ||
| - | [[Category: Fujihashi, M | + | [[Category: Fujihashi, M]] |
| - | [[Category: Hagihara, H | + | [[Category: Hagihara, H]] |
| - | [[Category: Ito, S | + | [[Category: Ito, S]] |
| - | [[Category: Kita, A | + | [[Category: Kita, A]] |
| - | [[Category: Miki, K | + | [[Category: Miki, K]] |
| - | [[Category: Nonaka, T | + | [[Category: Nonaka, T]] |
| - | [[Category: Ozaki, K | + | [[Category: Ozaki, K]] |
[[Category: Alkaline]] | [[Category: Alkaline]] | ||
| - | [[Category: Alpha-amylase]] | ||
[[Category: Calcium-free]] | [[Category: Calcium-free]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
Revision as of 13:18, 6 January 2015
Crystal structure of AmyK38 with potassium ion
| |||||||||||
Categories: Alpha-amylase | Bacillus sp. ksm-k38 | Fujihashi, M | Hagihara, H | Ito, S | Kita, A | Miki, K | Nonaka, T | Ozaki, K | Alkaline | Calcium-free | Hydrolase

