This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1t9i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1t9i]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T9I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T9I FirstGlance]. <br>
<table><tr><td colspan='2'>[[1t9i]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T9I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1T9I FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1g9y|1g9y]], [[1g9z|1g9z]], [[1t9j|1t9j]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1g9y|1g9y]], [[1g9z|1g9z]], [[1t9j|1t9j]]</td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CR.LSU INTRON OF CHOROPLAST 23S RRNA GENE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3055 Chlamydomonas reinhardtii])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CR.LSU INTRON OF CHOROPLAST 23S RRNA GENE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3055 Chlamydomonas reinhardtii])</td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t9i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t9i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1t9i RCSB], [http://www.ebi.ac.uk/pdbsum/1t9i PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t9i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t9i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1t9i RCSB], [http://www.ebi.ac.uk/pdbsum/1t9i PDBsum]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/DNE1_CHLRE DNE1_CHLRE]] Endonuclease involved in group I intron homing. Recognizes and cleaves a 19-24 bp palindromic DNA site.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 34: Line 36:
</StructureSection>
</StructureSection>
[[Category: Chlamydomonas reinhardtii]]
[[Category: Chlamydomonas reinhardtii]]
-
[[Category: Boudreau, D.]]
+
[[Category: Boudreau, D]]
-
[[Category: Chevalier, B.]]
+
[[Category: Chevalier, B]]
-
[[Category: Lemieux, C.]]
+
[[Category: Lemieux, C]]
-
[[Category: Monnat, R J.]]
+
[[Category: Monnat, R J]]
-
[[Category: Otis, C.]]
+
[[Category: Otis, C]]
-
[[Category: Stephens, K.]]
+
[[Category: Stephens, K]]
-
[[Category: Stoddard, B L.]]
+
[[Category: Stoddard, B L]]
-
[[Category: Sussman, D.]]
+
[[Category: Sussman, D]]
-
[[Category: Turmel, M.]]
+
[[Category: Turmel, M]]
[[Category: Dna]]
[[Category: Dna]]
[[Category: Hydrolase-dna complex]]
[[Category: Hydrolase-dna complex]]
[[Category: Protein]]
[[Category: Protein]]

Revision as of 15:47, 24 December 2014

I-CreI(D20N)/DNA complex

1t9i, resolution 1.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools