1opo
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1opo]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Carnation_mottle_virus Carnation mottle virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OPO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OPO FirstGlance]. <br> | <table><tr><td colspan='2'>[[1opo]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Carnation_mottle_virus Carnation mottle virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OPO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OPO FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2tbv|2tbv]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2tbv|2tbv]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1opo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1opo RCSB], [http://www.ebi.ac.uk/pdbsum/1opo PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1opo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1opo RCSB], [http://www.ebi.ac.uk/pdbsum/1opo PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/COAT_CARMV COAT_CARMV]] Capsid protein self-assembles to form an icosahedral capsid with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180 capsid proteins. Also acts as a suppressor of RNA-mediated gene silencing, also known as post-transcriptional gene silencing (PTGS), a mechanism of plant viral defense that limits the accumulation of viral RNAs (By similarity). | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 33: | Line 35: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Carnation mottle virus]] | [[Category: Carnation mottle virus]] | ||
| - | [[Category: Dauter, Z | + | [[Category: Dauter, Z]] |
| - | [[Category: Fry, E | + | [[Category: Fry, E]] |
| - | [[Category: Mikhailov, A M | + | [[Category: Mikhailov, A M]] |
| - | [[Category: Morgunova, E | + | [[Category: Morgunova, E]] |
| - | [[Category: Stuart, D | + | [[Category: Stuart, D]] |
| - | [[Category: Vainshtein, B K | + | [[Category: Vainshtein, B K]] |
| - | [[Category: Wilson, K S | + | [[Category: Wilson, K S]] |
| - | [[Category: Mashchuk, V Stel | + | [[Category: Mashchuk, V Stel]] |
[[Category: Carmovirus]] | [[Category: Carmovirus]] | ||
[[Category: Icosahedral virus]] | [[Category: Icosahedral virus]] | ||
Revision as of 21:31, 24 December 2014
THE STRUCTURE OF CARNATION MOTTLE VIRUS
| |||||||||||
