2zrd
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2zrd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_smegmatis_str._mc2_155 Mycobacterium smegmatis str. mc2 155]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZRD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZRD FirstGlance]. <br> | <table><tr><td colspan='2'>[[2zrd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_smegmatis_str._mc2_155 Mycobacterium smegmatis str. mc2 155]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZRD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZRD FirstGlance]. <br> | ||
- | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr> |
- | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ubc|1ubc]], [[2zr0|2zr0]], [[2zrc|2zrc]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ubc|1ubc]], [[2zr0|2zr0]], [[2zrc|2zrc]]</td></tr> |
- | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Deleted_entry Deleted entry], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.99.37 3.4.99.37] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Deleted_entry Deleted entry], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.99.37 3.4.99.37] </span></td></tr> |
- | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zrd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zrd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zrd RCSB], [http://www.ebi.ac.uk/pdbsum/2zrd PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zrd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zrd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zrd RCSB], [http://www.ebi.ac.uk/pdbsum/2zrd PDBsum]</span></td></tr> |
- | <table> | + | </table> |
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/RECA_MYCS2 RECA_MYCS2]] Required for homologous recombination (HR) and the bypass of mutagenic DNA lesions (double strand breaks, DSB) by the SOS response. Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. Numerous X-ray crystals have been resolved under different conditions which indicate the flexibility of the protein, essential to its function. Gln-196 contributes to this plasticity by acting as a switch residue, which transmits the effect of nucleotide binding to the DNA-binding region.<ref>PMID:17360246</ref> <ref>PMID:17496093</ref> <ref>PMID:21219454</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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[[Category: Deleted entry]] | [[Category: Deleted entry]] | ||
[[Category: Mycobacterium smegmatis str. mc2 155]] | [[Category: Mycobacterium smegmatis str. mc2 155]] | ||
- | [[Category: Chandra, N R | + | [[Category: Chandra, N R]] |
- | [[Category: Manjunath, G P | + | [[Category: Manjunath, G P]] |
- | [[Category: Muniyappa, K | + | [[Category: Muniyappa, K]] |
- | [[Category: Prabu, J R | + | [[Category: Prabu, J R]] |
- | [[Category: Vijayan, M | + | [[Category: Vijayan, M]] |
[[Category: Atp-binding]] | [[Category: Atp-binding]] | ||
[[Category: Dna damage]] | [[Category: Dna damage]] |
Revision as of 17:44, 25 December 2014
MsRecA Q196N ADP form IV
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Categories: Deleted entry | Mycobacterium smegmatis str. mc2 155 | Chandra, N R | Manjunath, G P | Muniyappa, K | Prabu, J R | Vijayan, M | Atp-binding | Dna damage | Dna recombination | Dna repair | Dna-binding | Dna-repair | Hydrolase | Nucleotide-binding | Reca mutant | Recombination | Sos response