This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3d1i
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3d1i]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D1I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3D1I FirstGlance]. <br> | <table><tr><td colspan='2'>[[3d1i]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D1I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3D1I FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NO2:NITRITE+ION'>NO2</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NO2:NITRITE+ION'>NO2</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ot4|2ot4]], [[2zo5|2zo5]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ot4|2ot4]], [[2zo5|2zo5]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d1i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d1i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3d1i RCSB], [http://www.ebi.ac.uk/pdbsum/3d1i PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d1i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d1i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3d1i RCSB], [http://www.ebi.ac.uk/pdbsum/3d1i PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/Q5F2I3_9GAMM Q5F2I3_9GAMM]] Plays a role in nitrite reduction (By similarity).[SAAS:SAAS003321_004_001592] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 33: | Line 35: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Thioalkalivibrio nitratireducens]] | [[Category: Thioalkalivibrio nitratireducens]] | ||
| - | [[Category: Antipov, A N | + | [[Category: Antipov, A N]] |
| - | [[Category: Bourenkov, G P | + | [[Category: Bourenkov, G P]] |
| - | [[Category: Boyko, K M | + | [[Category: Boyko, K M]] |
| - | [[Category: Lamzin, V S | + | [[Category: Lamzin, V S]] |
| - | [[Category: Polyakov, K M | + | [[Category: Polyakov, K M]] |
| - | [[Category: Popov, A N | + | [[Category: Popov, A N]] |
| - | [[Category: Popov, V O | + | [[Category: Popov, V O]] |
| - | [[Category: Slutsky, A | + | [[Category: Slutsky, A]] |
| - | [[Category: Tikhonova, T V | + | [[Category: Tikhonova, T V]] |
| - | [[Category: Zvyagilskaya, R A | + | [[Category: Zvyagilskaya, R A]] |
[[Category: Cytochrome c nitrite reductase]] | [[Category: Cytochrome c nitrite reductase]] | ||
[[Category: Nrfa]] | [[Category: Nrfa]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
[[Category: Sulfite reductase]] | [[Category: Sulfite reductase]] | ||
Revision as of 08:03, 24 December 2014
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with nitrite
| |||||||||||

