This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1yem
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1yem]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1xkc 1xkc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YEM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YEM FirstGlance]. <br> | <table><tr><td colspan='2'>[[1yem]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1xkc 1xkc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YEM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YEM FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yem OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yem RCSB], [http://www.ebi.ac.uk/pdbsum/1yem PDBsum], [http://www.topsan.org/Proteins/SECSG/1yem TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yem OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yem RCSB], [http://www.ebi.ac.uk/pdbsum/1yem PDBsum], [http://www.topsan.org/Proteins/SECSG/1yem TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 19: | Line 19: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Pyrococcus furiosus]] | [[Category: Pyrococcus furiosus]] | ||
| - | [[Category: Adams, M W.W | + | [[Category: Adams, M W.W]] |
| - | [[Category: Chang, J | + | [[Category: Chang, J]] |
| - | [[Category: Chen, L | + | [[Category: Chen, L]] |
| - | [[Category: III, W B.Arendall | + | [[Category: III, W B.Arendall]] |
| - | [[Category: Jenney, F E | + | [[Category: Jenney, F E]] |
| - | [[Category: Lee, D | + | [[Category: Lee, D]] |
| - | [[Category: Lin, D | + | [[Category: Lin, D]] |
| - | [[Category: Liu, Z J | + | [[Category: Liu, Z J]] |
| - | [[Category: Ng, J D | + | [[Category: Ng, J D]] |
| - | [[Category: Praissman, J L | + | [[Category: Praissman, J L]] |
| - | [[Category: Richardson, D C | + | [[Category: Richardson, D C]] |
| - | [[Category: Richardson, J S | + | [[Category: Richardson, J S]] |
| - | [[Category: Rose, J P | + | [[Category: Rose, J P]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Shah, A | + | [[Category: Shah, A]] |
| - | [[Category: Tempel, W | + | [[Category: Tempel, W]] |
| - | [[Category: Wang, B C | + | [[Category: Wang, B C]] |
| - | [[Category: Yang, H | + | [[Category: Yang, H]] |
[[Category: Conserved hypothetical protein]] | [[Category: Conserved hypothetical protein]] | ||
[[Category: Hyperthermophile]] | [[Category: Hyperthermophile]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Secsg]] | [[Category: Secsg]] | ||
| - | [[Category: Southeast collaboratory for structural genomic]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 22:45, 25 December 2014
Conserved hypothetical protein Pfu-838710-001 from Pyrococcus furiosus
| |||||||||||
Categories: Pyrococcus furiosus | Adams, M W.W | Chang, J | Chen, L | III, W B.Arendall | Jenney, F E | Lee, D | Lin, D | Liu, Z J | Ng, J D | Praissman, J L | Richardson, D C | Richardson, J S | Rose, J P | Structural genomic | Shah, A | Tempel, W | Wang, B C | Yang, H | Conserved hypothetical protein | Hyperthermophile | PSI, Protein structure initiative | Secsg | Unknown function
