2kkd
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2kkd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qkz 2qkz]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KKD FirstGlance]. <br> | <table><tr><td colspan='2'>[[2kkd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qkz 2qkz]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KKD FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[8rxn|8rxn]], [[2ql0|2ql0]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[8rxn|8rxn]], [[2ql0|2ql0]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rub, DVU_3184 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 Desulfovibrio vulgaris str. Hildenborough])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rub, DVU_3184 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 Desulfovibrio vulgaris str. Hildenborough])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kkd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kkd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kkd RCSB], [http://www.ebi.ac.uk/pdbsum/2kkd PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kkd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kkd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kkd RCSB], [http://www.ebi.ac.uk/pdbsum/2kkd PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/RUBR_DESVH RUBR_DESVH]] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule. Electron acceptor for cytoplasmic lactate dehydrogenase. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Desulfovibrio vulgaris str. hildenborough]] | [[Category: Desulfovibrio vulgaris str. hildenborough]] | ||
| - | [[Category: Duarte, I C | + | [[Category: Duarte, I C]] |
| - | [[Category: Macedo, A L | + | [[Category: Macedo, A L]] |
| - | [[Category: Markley, J L | + | [[Category: Markley, J L]] |
| - | [[Category: Moura, I | + | [[Category: Moura, I]] |
| - | [[Category: Moura, J J.G | + | [[Category: Moura, J J.G]] |
| - | [[Category: Nunes, S G | + | [[Category: Nunes, S G]] |
| - | [[Category: Volkman, B F | + | [[Category: Volkman, B F]] |
[[Category: Electron transport]] | [[Category: Electron transport]] | ||
[[Category: Iron]] | [[Category: Iron]] | ||
[[Category: Metal-binding]] | [[Category: Metal-binding]] | ||
[[Category: Transport]] | [[Category: Transport]] | ||
Revision as of 07:34, 24 December 2014
NMR Structure of Ni Substitued Desulfovibrio vulgaris Rubredoxin
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