This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2ko1
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2ko1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlorobaculum_tepidum Chlorobaculum tepidum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KO1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KO1 FirstGlance]. <br> | <table><tr><td colspan='2'>[[2ko1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlorobaculum_tepidum Chlorobaculum tepidum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KO1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KO1 FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ibw|3ibw]]</td></tr> | + | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ibw|3ibw]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CT1545, relA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1097 Chlorobaculum tepidum])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CT1545, relA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1097 Chlorobaculum tepidum])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/GTP_diphosphokinase GTP diphosphokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.6.5 2.7.6.5] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/GTP_diphosphokinase GTP diphosphokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.6.5 2.7.6.5] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ko1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ko1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ko1 RCSB], [http://www.ebi.ac.uk/pdbsum/2ko1 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ko1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ko1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ko1 RCSB], [http://www.ebi.ac.uk/pdbsum/2ko1 PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/Q8KC80_CHLTE Q8KC80_CHLTE]] In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance (By similarity).[RuleBase:RU003847] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 22: | Line 24: | ||
[[Category: Chlorobaculum tepidum]] | [[Category: Chlorobaculum tepidum]] | ||
[[Category: GTP diphosphokinase]] | [[Category: GTP diphosphokinase]] | ||
| - | [[Category: Acton, T B | + | [[Category: Acton, T B]] |
| - | [[Category: Ciccosanti, C | + | [[Category: Ciccosanti, C]] |
| - | [[Category: Eletsky, A | + | [[Category: Eletsky, A]] |
| - | [[Category: Everett, J K | + | [[Category: Everett, J K]] |
| - | [[Category: Garcia, E | + | [[Category: Garcia, E]] |
| - | [[Category: Jiang, M | + | [[Category: Jiang, M]] |
| - | [[Category: Lee, H | + | [[Category: Lee, H]] |
| - | [[Category: Montelione, G T | + | [[Category: Montelione, G T]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Nair, R | + | [[Category: Nair, R]] |
| - | [[Category: Prestegard, J H | + | [[Category: Prestegard, J H]] |
| - | [[Category: Rost, B | + | [[Category: Rost, B]] |
| - | [[Category: Szyperski, T | + | [[Category: Szyperski, T]] |
| - | [[Category: Wang, H | + | [[Category: Wang, H]] |
| - | [[Category: Xiao, R | + | [[Category: Xiao, R]] |
[[Category: Alpha+beta]] | [[Category: Alpha+beta]] | ||
[[Category: Homodimer]] | [[Category: Homodimer]] | ||
[[Category: Kinase]] | [[Category: Kinase]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
Revision as of 10:02, 25 December 2014
Solution NMR structure of the ACT domain from GTP pyrophosphokinase of Chlorobium tepidum. Northeast Structural Genomics Consortium Target CtR148A
| |||||||||||
Categories: Chlorobaculum tepidum | GTP diphosphokinase | Acton, T B | Ciccosanti, C | Eletsky, A | Everett, J K | Garcia, E | Jiang, M | Lee, H | Montelione, G T | Structural genomic | Nair, R | Prestegard, J H | Rost, B | Szyperski, T | Wang, H | Xiao, R | Alpha+beta | Homodimer | Kinase | Nesg | PSI, Protein structure initiative | Transferase

