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2q0o
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2q0o]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sinorhizobium_fredii_ngr234 Sinorhizobium fredii ngr234]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q0O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q0O FirstGlance]. <br> | <table><tr><td colspan='2'>[[2q0o]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sinorhizobium_fredii_ngr234 Sinorhizobium fredii ngr234]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q0O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q0O FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LAE:3-OXO-OCTANOIC+ACID+(2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE'>LAE</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LAE:3-OXO-OCTANOIC+ACID+(2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE'>LAE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">traR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=394 Sinorhizobium fredii NGR234]), traM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=394 Sinorhizobium fredii NGR234])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">traR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=394 Sinorhizobium fredii NGR234]), traM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=394 Sinorhizobium fredii NGR234])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q0o OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q0o RCSB], [http://www.ebi.ac.uk/pdbsum/2q0o PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q0o OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q0o RCSB], [http://www.ebi.ac.uk/pdbsum/2q0o PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/TRAR_RHISN TRAR_RHISN]] Positive regulation of conjugal transfer. TraR activates target genes in the presence of AAI and also activates traR and traI themselves (By similarity). [[http://www.uniprot.org/uniprot/TRAM_RHISN TRAM_RHISN]] Acts to antagonize TraR-dependent activation (Potential). | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Sinorhizobium fredii ngr234]] | [[Category: Sinorhizobium fredii ngr234]] | ||
| - | [[Category: Chen, G | + | [[Category: Chen, G]] |
| - | [[Category: Chen, L | + | [[Category: Chen, L]] |
| - | [[Category: Fuqua, C | + | [[Category: Fuqua, C]] |
| - | [[Category: Jeffrey, P D | + | [[Category: Jeffrey, P D]] |
| - | [[Category: Shi, Y | + | [[Category: Shi, Y]] |
[[Category: Helix-turn-helix]] | [[Category: Helix-turn-helix]] | ||
[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Two-helix coiled coil]] | [[Category: Two-helix coiled coil]] | ||
Revision as of 03:47, 25 December 2014
Crystal structure of an anti-activation complex in bacterial quorum sensing
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