This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2ogj
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2ogj]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OGJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OGJ FirstGlance]. <br> | <table><tr><td colspan='2'>[[2ogj]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OGJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OGJ FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ogj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ogj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ogj RCSB], [http://www.ebi.ac.uk/pdbsum/2ogj PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ogj TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ogj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ogj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ogj RCSB], [http://www.ebi.ac.uk/pdbsum/2ogj PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ogj TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 20: | Line 20: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Agrobacterium tumefaciens str. c58]] | [[Category: Agrobacterium tumefaciens str. c58]] | ||
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | [[Category: Kumaran, D | + | [[Category: Kumaran, D]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Sugadev, R | + | [[Category: Sugadev, R]] |
| - | [[Category: Swaminathan, S | + | [[Category: Swaminathan, S]] |
| - | + | ||
[[Category: Amido hydrolase]] | [[Category: Amido hydrolase]] | ||
[[Category: Binuclear zinc]] | [[Category: Binuclear zinc]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Imidazole complex]] | [[Category: Imidazole complex]] | ||
| - | [[Category: New | + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] |
| - | + | [[Category: PSI, Protein structure initiative]] | |
| - | [[Category: Protein structure initiative | + | |
| - | + | ||
| - | + | ||
[[Category: Tim barrel]] | [[Category: Tim barrel]] | ||
Revision as of 13:19, 6 November 2014
Crystal structure of a dihydroorotase
| |||||||||||
Categories: Agrobacterium tumefaciens str. c58 | Burley, S K | Kumaran, D | Structural genomic | Sugadev, R | Swaminathan, S | Amido hydrolase | Binuclear zinc | Hydrolase | Imidazole complex | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | Tim barrel

